RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DIEXFQ68CQ4 756 aaKnown RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 NKD1Q969G9 470 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 ZNF512BQ96KM6 892 aaPredicted RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 CNNM2Q9H8M5 875 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 RTEL1Q9NZ71 1219 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 MBD1Q9UIS9 605 aaPredicted RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 DDX41Q9UJV9 622 aaKnown RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 PEX10O60683 326 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 ACRP10323 421 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 GBP1P32455 592 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 AFF3P51826 1226 aaKnown RBP5.28□□□□□ -1.56
CHD9-211ENST00000564600 TEKQ02763 1124 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 ZPBP2Q6X784 338 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 NLRC3Q7RTR2 1065 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 TMEM192Q8IY95 271 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 LILRA2Q8N149 483 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 SLC9A7Q96T83 725 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 CWC22Q9HCG8 908 aaKnown RBP5.28□□□□□ -1.56
CHD9-211ENST00000564600 MINPP1Q9UNW1 487 aa5.28□□□□□ -1.56
CHD9-211ENST00000564600 FAM86C2PA6NEL3 165 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 NME1P15531 152 aaKnown RBP5.27□□□□□ -1.57
CHD9-211ENST00000564600 VAMP1P23763 118 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 HDLBPQ00341 1268 aaKnown RBP5.27□□□□□ -1.57
CHD9-211ENST00000564600 NBPF12Q5TAG4 269 aaPredicted RBP5.27□□□□□ -1.57
CHD9-211ENST00000564600 TMC3Q7Z5M5 1100 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 RNF34Q969K3 372 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 MRRFQ96E11 262 aaKnown RBP5.27□□□□□ -1.57
CHD9-211ENST00000564600 G6PC3Q9BUM1 346 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 ASPNQ9BXN1 380 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 METTL5Q9NRN9 209 aaKnown RBP5.27□□□□□ -1.57
CHD9-211ENST00000564600 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 IRAK3Q9Y616 596 aa5.27□□□□□ -1.57
CHD9-211ENST00000564600 MEIS3P2A8K0S8 358 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 RFXAPO00287 272 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 VIPR1P32241 457 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 ZNF165P49910 485 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 RUFY4Q6ZNE9 571 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 DACT3Q96B18 629 aaPredicted RBP5.26□□□□□ -1.57
CHD9-211ENST00000564600 CNTD2Q9H8S5 307 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 KCNH3Q9ULD8 1083 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 ZNRF3Q9ULT6 936 aa5.26□□□□□ -1.57
CHD9-211ENST00000564600 OR14I1A6ND48 311 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
CHD9-211ENST00000564600 SASH1O94885 1247 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 RPL10P27635 214 aaKnown RBP5.25□□□□□ -1.57
CHD9-211ENST00000564600 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 MLECQ14165 292 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 NR0B2Q15466 257 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 NBPF9Q3BBW0 867 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 CXorf38Q8TB03 319 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 DHX38Q92620 1227 aaKnown RBP5.25□□□□□ -1.57
CHD9-211ENST00000564600 SIGLEC10Q96LC7 697 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 SLC6A18Q96N87 628 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 PLCD4Q9BRC7 762 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 SIRT5Q9NXA8 310 aa5.25□□□□□ -1.57
CHD9-211ENST00000564600 C9IYK1 514 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 TNFRSF10CO14798 259 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 FKTNO75072 461 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 CELA3BP08861 270 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 CDR1P51861 262 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 PAK2Q13177 524 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 NMIQ13287 307 aaPredicted RBP5.24□□□□□ -1.57
CHD9-211ENST00000564600 ZYXQ15942 572 aaKnown RBP5.24□□□□□ -1.57
CHD9-211ENST00000564600 CCDC81Q6ZN84 652 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 DBX2Q6ZNG2 339 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 NLRX1Q86UT6 975 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 NT5DC4Q86YG4 428 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 TMEFF1Q8IYR6 380 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 USHBP1Q8N6Y0 703 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 LINC01599Q8WXQ3 324 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 ZNF428Q96B54 188 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 HDAC8Q9BY41 377 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 FOXP3Q9BZS1 431 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 PRDM14Q9GZV8 571 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.24□□□□□ -1.57
CHD9-211ENST00000564600 BCL11AQ9H165 835 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 ZMYM5Q9UJ78 669 aa5.24□□□□□ -1.57
CHD9-211ENST00000564600 CLEC3AO75596 197 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 CLEC16AQ2KHT3 1053 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 WAPLQ7Z5K2 1190 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 SPPL2CQ8IUH8 684 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 ANKS4BQ8N8V4 417 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 SYTL4Q96C24 671 aaPredicted RBP5.23□□□□□ -1.57
CHD9-211ENST00000564600 TMPRSS5Q9H3S3 457 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 GINM1Q9NU53 330 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 ZNF281Q9Y2X9 895 aa5.23□□□□□ -1.57
CHD9-211ENST00000564600 TMEM82A0PJX8 343 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 SHOXO15266 292 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 PRAMEF1O95521 474 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 RAD51AP2Q09MP3 1159 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 DUSP4Q13115 394 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 TDRD10Q5VZ19 366 aaKnown RBP5.22□□□□□ -1.57
CHD9-211ENST00000564600 CEP128Q6ZU80 1094 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 PPFIBP1Q86W92 1011 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 TCTN2Q96GX1 697 aa5.22□□□□□ -1.57
CHD9-211ENST00000564600 MEIS1O00470 390 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 INSRRP14616 1297 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 CCNFP41002 786 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 CTSKP43235 329 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms