RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ZFYVE28Q9HCC9 887 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 PARP14Q460N5 1801 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 KLRF2D3W0D1 207 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
KARS-204ENST00000564578 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 PRR12Q9ULL5 1215 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 MYPNQ86TC9 1320 aa14.55□□□□□ -0.08
KARS-204ENST00000564578 VWA5AO00534 786 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 ZBTB43O43298 467 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CNMDO75829 334 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 RABEP1Q15276 862 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
KARS-204ENST00000564578 REPS2Q8NFH8 660 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CHURC1Q8WUH1 139 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 BTBD7Q9P203 1132 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 TPCN1Q9ULQ1 816 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
KARS-204ENST00000564578 CENPFP49454 3210 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CYTH3O43739 400 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CALM1P0DP23 149 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CALM2P0DP24 149 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CALM3P0DP25 149 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 BCRP11274 1271 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 CDC27P30260 824 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 RCAN1P53805 252 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 Q3C1V9 767 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 FAM160B2Q86V87 743 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 ANKRD13CQ8N6S4 541 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 BEGAINQ9BUH8 593 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 HTTP42858 3142 aa14.54□□□□□ -0.08
KARS-204ENST00000564578 GOLGA8BA8MQT2 603 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 CTCFLQ8NI51 663 aaPredicted RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 ZNF274Q96GC6 653 aaPredicted RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 ZNF214Q9UL59 606 aaPredicted RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 BAZ2BQ9UIF8 2168 aaKnown RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 ADD1P35611 737 aaKnown RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 SNAP25P60880 206 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 ANKRD1Q15327 319 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 ADGRF4Q8IZF3 695 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 SRBD1Q8N5C6 995 aaKnown RBP14.53□□□□□ -0.08
KARS-204ENST00000564578 MORF4L1Q9UBU8 362 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
KARS-204ENST00000564578 NID2Q14112 1375 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 ZNF536O15090 1300 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 FOXN1O15353 648 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 LARGE1O95461 756 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 HSPA1AP0DMV8 641 aaKnown RBP14.52□□□□□ -0.09
KARS-204ENST00000564578 HSPA1BP0DMV9 641 aaKnown RBP14.52□□□□□ -0.09
KARS-204ENST00000564578 KIF5BP33176 963 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 CAP1Q01518 475 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 FUT2Q10981 343 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 FAM110CQ1W6H9 321 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 PAGR1Q9BTK6 254 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 JMJD4Q9H9V9 463 aa14.52□□□□□ -0.09
KARS-204ENST00000564578 NCOA5Q9HCD5 579 aaKnown RBP14.52□□□□□ -0.09
KARS-204ENST00000564578 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
KARS-204ENST00000564578 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 GPR25O00155 361 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■■□□ 17.5
KARS-204ENST00000564578 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
KARS-204ENST00000564578 ME3Q16798 604 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 RTN1Q16799 776 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 NOM1Q5C9Z4 860 aaKnown RBP14.51□□□□□ -0.09
KARS-204ENST00000564578 TMTC3Q6ZXV5 915 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 NOL8Q76FK4 1167 aaKnown RBP14.51□□□□□ -0.09
KARS-204ENST00000564578 MB21D1Q8N884 522 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 GTF3C2Q8WUA4 911 aaPredicted RBP14.51□□□□□ -0.09
KARS-204ENST00000564578 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 RANBP17Q9H2T7 1088 aaKnown RBP14.51□□□□□ -0.09
KARS-204ENST00000564578 A0A0G2JMZ2 1700 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 ERVK-9P63128 1117 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 ERVK-24P63145 666 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 GPRC5AQ8NFJ5 357 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
KARS-204ENST00000564578 SMARCA1P28370 1054 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 CTGFP29279 349 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 SCRN1Q12765 414 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 STK3Q13188 491 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 PPP2R5BQ15173 497 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 NTRK3Q16288 839 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 CCDC82Q8N4S0 544 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 ZNF296Q8WUU4 475 aaPredicted RBP14.5□□□□□ -0.09
KARS-204ENST00000564578 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
KARS-204ENST00000564578 SPATC1LQ9H0A9 340 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms