RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ECHDC1Q9NTX5 307 aa16.88■□□□□ 0.29
CDR2-204ENST00000564542 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
CDR2-204ENST00000564542 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 F5H6K3 240 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 ATP2A1O14983 1001 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 PQBP1O60828 265 aaKnown RBP16.87■□□□□ 0.29
CDR2-204ENST00000564542 NDUFB10O96000 172 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 KLRC3Q07444 240 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 PRPF38AQ8NAV1 312 aaKnown RBP16.87■□□□□ 0.29
CDR2-204ENST00000564542 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
CDR2-204ENST00000564542 VCANP13611 3396 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
CDR2-204ENST00000564542 RAG1P15918 1043 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 ACLYP53396 1101 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDR2-204ENST00000564542 ANKRD33Q7Z3H0 272 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 ZNF467Q7Z7K2 595 aaPredicted RBP16.86■□□□□ 0.29
CDR2-204ENST00000564542 KBTBD3Q8NAB2 608 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 APPBP2Q92624 585 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
CDR2-204ENST00000564542 TOX2Q96NM4 488 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 TTYH1Q9H313 450 aaPredicted RBP16.86■□□□□ 0.29
CDR2-204ENST00000564542 RIPK3Q9Y572 518 aa16.86■□□□□ 0.29
CDR2-204ENST00000564542 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 IGKV6D-41A0A0C4DH26 115 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 MINDY4BA8MYZ0 360 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 SNAI1O95863 264 aaPredicted RBP16.85■□□□□ 0.29
CDR2-204ENST00000564542 EPHB4P54760 987 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 FPGSQ05932 587 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
CDR2-204ENST00000564542 STK11IPQ8N1F8 1099 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 KLHDC9Q8NEP7 349 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 MAFAQ8NHW3 353 aaPredicted RBP16.85■□□□□ 0.29
CDR2-204ENST00000564542 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 GPATCH3Q96I76 525 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 TMEM39AQ9NV64 488 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 RCAN3Q9UKA8 241 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
CDR2-204ENST00000564542 FAM184BQ9ULE4 1060 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
CDR2-204ENST00000564542 GNAT2P19087 354 aa16.84■□□□□ 0.29
CDR2-204ENST00000564542 FAAP100Q0VG06 881 aa16.84■□□□□ 0.29
CDR2-204ENST00000564542 CCSAPQ6IQ19 270 aaPredicted RBP16.84■□□□□ 0.29
CDR2-204ENST00000564542 OSBP2Q969R2 916 aa16.84■□□□□ 0.29
CDR2-204ENST00000564542 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
CDR2-204ENST00000564542 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
CDR2-204ENST00000564542 EPB41L4AQ9HCS5 686 aaPredicted RBP16.84■□□□□ 0.29
CDR2-204ENST00000564542 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 RNF113AO15541 343 aaKnown RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 GPAA1O43292 621 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 ZBED4O75132 1171 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 ZFYP08048 801 aaPredicted RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 CST5P28325 142 aaPredicted RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 TDO2P48775 406 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 OAZ1P54368 228 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 KCNA10Q16322 511 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 CPXCR1Q8N123 301 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 MYLIPQ8WY64 445 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 MKL1Q969V6 931 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 PLIN4Q96Q06 1357 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 SPTBN5Q9NRC6 3674 aaKnown RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 CLIP2Q9UDT6 1046 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 FEM1BQ9UK73 627 aa16.83■□□□□ 0.28
CDR2-204ENST00000564542 CTDP1Q9Y5B0 961 aaPredicted RBP16.83■□□□□ 0.28
CDR2-204ENST00000564542 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 FOSL2P15408 326 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
CDR2-204ENST00000564542 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 CEP95Q96GE4 821 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 ABHD16BQ9H3Z7 469 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
CDR2-204ENST00000564542 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.82■□□□□ 0.28
CDR2-204ENST00000564542 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
CDR2-204ENST00000564542 ELP1O95163 1332 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 MCM3APO60318 1980 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 MYADML2A6NDP7 307 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 M0R2C6 588 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 PRDM1O75626 825 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 TTLL1O95922 423 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 TIMP1P01033 207 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 TSHZ3Q63HK5 1081 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 ANKRD35Q8N283 1001 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
CDR2-204ENST00000564542 FGD4Q96M96 766 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 GLT1D1Q96MS3 346 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms