RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 FGD4Q96M96 766 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
KNOP1-202ENST00000564480 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.24
KNOP1-202ENST00000564480 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 TMEM39AQ9NV64 488 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 MYH8P13535 1937 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 PLXNA1Q9UIW2 1896 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 F5H6K3 240 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
KNOP1-202ENST00000564480 NDUFB10O96000 172 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 FOSL2P15408 326 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 FPGSQ05932 587 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 KLRC3Q07444 240 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 KCNA10Q16322 511 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 SNRNP48Q6IEG0 339 aaKnown RBP16.53■□□□□ 0.24
KNOP1-202ENST00000564480 USP38Q8NB14 1042 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 TSEN34Q9BSV6 310 aaKnown RBP16.53■□□□□ 0.24
KNOP1-202ENST00000564480 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
KNOP1-202ENST00000564480 HMMRO75330 724 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 MAMDC4Q6UXC1 1216 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 TOX2Q96NM4 488 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.52■□□□□ 0.249e-8■■□□□ 12.5
KNOP1-202ENST00000564480 TEX13BQ9BXU2 312 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 TBX21Q9UL17 535 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 FAM184BQ9ULE4 1060 aa16.52■□□□□ 0.24
KNOP1-202ENST00000564480 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.23
KNOP1-202ENST00000564480 IGKV6D-41A0A0C4DH26 115 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 CDK7P50613 346 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 SBK1Q52WX2 424 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
KNOP1-202ENST00000564480 NYAP2Q9P242 653 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 ZHX1Q9UKY1 873 aaPredicted RBP16.51■□□□□ 0.23
KNOP1-202ENST00000564480 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
KNOP1-202ENST00000564480 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 GRXCR1A8MXD5 290 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 DCDC2CA8MYV0 355 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 CTAGE5O15320 804 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 TIMP1P01033 207 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 DNAJB2P25686 324 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 COPB2P35606 906 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
KNOP1-202ENST00000564480 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
KNOP1-202ENST00000564480 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
KNOP1-202ENST00000564480 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
KNOP1-202ENST00000564480 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
KNOP1-202ENST00000564480 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
KNOP1-202ENST00000564480 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
KNOP1-202ENST00000564480 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 ATP2A1O14983 1001 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
KNOP1-202ENST00000564480 PBX2P40425 430 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 ACVR2BQ13705 512 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
KNOP1-202ENST00000564480 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
KNOP1-202ENST00000564480 MOXD2PA6NHM9 499 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 PRDM1O75626 825 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 ASGR1P07306 291 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 CSF2RAP15509 400 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 PTGS1P23219 599 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 CST5P28325 142 aaPredicted RBP16.48■□□□□ 0.23
KNOP1-202ENST00000564480 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 TMEM240Q5SV17 173 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 RASIP1Q5U651 963 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 MFSD5Q6N075 450 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
KNOP1-202ENST00000564480 NUP133Q8WUM0 1156 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
KNOP1-202ENST00000564480 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 SLC38A10Q9HBR0 1119 aa16.48■□□□□ 0.23
KNOP1-202ENST00000564480 DDX49Q9Y6V7 483 aaKnown RBP16.48■□□□□ 0.23
KNOP1-202ENST00000564480 C6orf222P0C671 652 aaPredicted RBP16.47■□□□□ 0.23
KNOP1-202ENST00000564480 ACRP10323 421 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 MS4A1P11836 297 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 ZSCAN25Q6NSZ9 544 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.47■□□□□ 0.23
KNOP1-202ENST00000564480 MKL1Q969V6 931 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 CEP95Q96GE4 821 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
KNOP1-202ENST00000564480 ASTN1O14525 1302 aa16.46■□□□□ 0.23
KNOP1-202ENST00000564480 ELP1O95163 1332 aa16.46■□□□□ 0.23
KNOP1-202ENST00000564480 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.46■□□□□ 0.23
KNOP1-202ENST00000564480 M0R2C6 588 aa16.46■□□□□ 0.23
KNOP1-202ENST00000564480 ZBED4O75132 1171 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms