RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MYCNP04198 464 aaPredicted RBP28.43■■■□□ 2.14
NME3-206ENST00000564252 PDE4BQ07343 736 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 PPARAQ07869 468 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 SNX17Q15036 470 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 LRRC47Q8N1G4 583 aaKnown RBP28.43■■■□□ 2.14
NME3-206ENST00000564252 GMCL1P1Q8NEA9 526 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 NEDD1Q8NHV4 660 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 LTBP2Q14767 1821 aa28.43■■■□□ 2.14
NME3-206ENST00000564252 ZNF865P0CJ78 1059 aaPredicted RBP28.42■■■□□ 2.14
NME3-206ENST00000564252 ADCYAP1R1P41586 468 aa28.42■■■□□ 2.14
NME3-206ENST00000564252 KIFC2Q96AC6 838 aa28.42■■■□□ 2.14
NME3-206ENST00000564252 LBHD1Q9BQE6 289 aaPredicted RBP28.42■■■□□ 2.14
NME3-206ENST00000564252 SLC38A10Q9HBR0 1119 aa28.42■■■□□ 2.14
NME3-206ENST00000564252 XPNPEP3Q9NQH7 507 aa28.42■■■□□ 2.14
NME3-206ENST00000564252 FEM1BQ9UK73 627 aa28.42■■■□□ 2.14
NME3-206ENST00000564252 FOXP2O15409 715 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 ZBED4O75132 1171 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 TSPY3P0CV98 308 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 TSPY8P0CW00 308 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 RARBP10826 455 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 CRBNQ96SW2 442 aa28.41■■■□□ 2.14
NME3-206ENST00000564252 DNAJC25-GNG10A0A024R161 153 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 SLC3A2P08195 630 aaKnown RBP28.4■■■□□ 2.14
NME3-206ENST00000564252 TFAP4Q01664 338 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 CCDC129Q6ZRS4 1044 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.4■■■□□ 2.14
NME3-206ENST00000564252 CPXCR1Q8N123 301 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 MSL3Q8N5Y2 521 aaKnown RBP28.4■■■□□ 2.14
NME3-206ENST00000564252 FERMT2Q96AC1 680 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 RAVER2Q9HCJ3 691 aaKnown RBP28.4■■■□□ 2.14
NME3-206ENST00000564252 PRKAG2Q9UGJ0 569 aa28.4■■■□□ 2.14
NME3-206ENST00000564252 TRIM60Q495X7 471 aa28.39■■■□□ 2.14
NME3-206ENST00000564252 ANKRD45Q5TZF3 282 aa28.39■■■□□ 2.14
NME3-206ENST00000564252 C1orf53Q5VUE5 145 aa28.39■■■□□ 2.14
NME3-206ENST00000564252 SLFN13Q68D06 897 aa28.39■■■□□ 2.14
NME3-206ENST00000564252 PHF24Q9UPV7 400 aa28.39■■■□□ 2.14
NME3-206ENST00000564252 CTDP1Q9Y5B0 961 aaPredicted RBP28.39■■■□□ 2.14
NME3-206ENST00000564252 PGK1P00558 417 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 BMP3P12645 472 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 AKR1A1P14550 325 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 DEFB123Q8N688 67 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 DDX11Q96FC9 970 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 CNPY2Q9Y2B0 182 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.38■■■□□ 2.13
NME3-206ENST00000564252 SYNGAP1Q96PV0 1343 aa28.38■■■□□ 2.13
NME3-206ENST00000564252 SLC4A3P48751 1232 aa28.37■■■□□ 2.13
NME3-206ENST00000564252 OAZ1P54368 228 aa28.37■■■□□ 2.13
NME3-206ENST00000564252 MAMDC4Q6UXC1 1216 aa28.37■■■□□ 2.13
NME3-206ENST00000564252 Q7L0L9 218 aa28.37■■■□□ 2.13
NME3-206ENST00000564252 RNF180Q86T96 592 aa28.37■■■□□ 2.13
NME3-206ENST00000564252 LENG1Q96BZ8 264 aaPredicted RBP28.37■■■□□ 2.13
NME3-206ENST00000564252 SNAI1O95863 264 aaPredicted RBP28.36■■■□□ 2.13
NME3-206ENST00000564252 PDLIM7Q9NR12 457 aa28.36■■■□□ 2.13
NME3-206ENST00000564252 ZBTB47Q9UFB7 747 aaPredicted RBP28.36■■■□□ 2.13
NME3-206ENST00000564252 ADAMTS4O75173 837 aa28.35■■■□□ 2.13
NME3-206ENST00000564252 CTDSPL2Q05D32 466 aa28.35■■■□□ 2.13
NME3-206ENST00000564252 HDAC1Q13547 482 aaPredicted RBP28.35■■■□□ 2.13
NME3-206ENST00000564252 ZNF467Q7Z7K2 595 aaPredicted RBP28.35■■■□□ 2.13
NME3-206ENST00000564252 CHST13Q8NET6 341 aa28.35■■■□□ 2.13
NME3-206ENST00000564252 EVI5LQ96CN4 794 aa28.35■■■□□ 2.13
NME3-206ENST00000564252 GMCL1Q96IK5 515 aa28.35■■■□□ 2.13
NME3-206ENST00000564252 PRDM5Q9NQX1 630 aaPredicted RBP28.35■■■□□ 2.13
NME3-206ENST00000564252 TMEM232C9JQI7 657 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 PDE1AP54750 535 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 VPS53Q5VIR6 699 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 FGD4Q96M96 766 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 INCENPQ9NQS7 918 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 FBXO40Q9UH90 709 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 TACC3Q9Y6A5 838 aa28.34■■■□□ 2.13
NME3-206ENST00000564252 FDX1P10109 184 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 STAT2P52630 851 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 ANKRD35Q8N283 1001 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 IL17RBQ9NRM6 502 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 ANAPC4Q9UJX5 808 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 FAM184BQ9ULE4 1060 aa28.33■■■□□ 2.13
NME3-206ENST00000564252 A0A1W2PQ45 241 aaPredicted RBP28.32■■■□□ 2.12
NME3-206ENST00000564252 A0A1W2PQY0 241 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 TSPY2A6NKD2 308 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 TLE2Q04725 743 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 PPP4R3BQ5MIZ7 849 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 SH3RF1Q7Z6J0 888 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 ZHX1Q9UKY1 873 aaPredicted RBP28.32■■■□□ 2.12
NME3-206ENST00000564252 SYNRGQ9UMZ2 1314 aa28.32■■■□□ 2.12
NME3-206ENST00000564252 TRIM43BA6NCK2 446 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 SLC1A4P43007 532 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 FAM160B2Q86V87 743 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 CHURC1Q8WUH1 139 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 STAG1Q8WVM7 1258 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 BADQ92934 168 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 TRIM43Q96BQ3 446 aaPredicted RBP28.31■■■□□ 2.12
NME3-206ENST00000564252 TSEN34Q9BSV6 310 aaKnown RBP28.31■■■□□ 2.12
NME3-206ENST00000564252 HELLSQ9NRZ9 838 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 HOMER2Q9NSB8 354 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 MTMR10Q9NXD2 777 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 ISY1Q9ULR0 285 aaKnown RBP28.31■■■□□ 2.12
NME3-206ENST00000564252 STX8Q9UNK0 236 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 MCM3APO60318 1980 aa28.31■■■□□ 2.12
NME3-206ENST00000564252 ZNF536O15090 1300 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 NMT2O60551 498 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 PLA2G6O60733 806 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms