RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 EPHB4P54760 987 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 GKAP1Q5VSY0 366 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 DPH5Q9H2P9 285 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 QTRT2Q9H974 415 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 STK38LQ9Y2H1 464 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 SH2B2O14492 632 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 SARNPP82979 210 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 CABP7Q86V35 215 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 CCDC50Q8IVM0 306 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 ABHD10Q9NUJ1 306 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 UTP11Q9Y3A2 253 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 MOCS3O95396 460 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 FBXW10Q5XX13 1052 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 NOA1Q8NC60 698 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 MTRF1LQ9UGC7 380 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 GDAQ9Y2T3 454 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-209ENST00000564068 IFNAR1P17181 557 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 MGARPQ8TDB4 240 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 HSPA1LP34931 641 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 PCK1P35558 622 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 PPARAQ07869 468 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 SFMBT2Q5VUG0 894 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
COMMD4-209ENST00000564068 TBCAO75347 108 aaKnown RBP13.97□□□□□ -0.17
COMMD4-209ENST00000564068 FDPSP14324 419 aaKnown RBP13.97□□□□□ -0.17
COMMD4-209ENST00000564068 CDC27P30260 824 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
COMMD4-209ENST00000564068 SNCBQ16143 134 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 INF2Q27J81 1249 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 PEX26Q7Z412 305 aa13.97□□□□□ -0.17
COMMD4-209ENST00000564068 H3BQF6 201 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 GNA11P29992 359 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 CETN2P41208 172 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 DZIP3Q86Y13 1208 aaKnown RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 LPIN2Q92539 896 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 NHEJ1Q9H9Q4 299 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 CRB1P82279 1406 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 PRKAB2O43741 272 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 CETN1Q12798 172 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 ASIC2Q16515 512 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 CCDC170Q8IYT3 715 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 RASGRP4Q8TDF6 673 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 STMN4Q9H169 189 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-209ENST00000564068 NFU1Q9UMS0 254 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 REREQ9P2R6 1566 aa13.96□□□□□ -0.17
COMMD4-209ENST00000564068 ACTN3Q08043 901 aaPredicted RBP13.96□□□□□ -0.18
COMMD4-209ENST00000564068 NAA35Q5VZE5 725 aa13.96□□□□□ -0.18
COMMD4-209ENST00000564068 COG1Q8WTW3 980 aa13.96□□□□□ -0.18
COMMD4-209ENST00000564068 GPKOWQ92917 476 aaPredicted RBP eCLIP13.96□□□□□ -0.18
COMMD4-209ENST00000564068 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 USP17L21D6R901 530 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 SASH3O75995 380 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 BAG3O95817 575 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 NEDD9Q14511 834 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 PPP2R5AQ15172 486 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 PNKPQ96T60 521 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 CHP1Q99653 195 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 MED23Q9ULK4 1368 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 FTCDO95954 541 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 NR1D1P20393 614 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 ARID4AP29374 1257 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 IFNAR2P48551 515 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 RBM5P52756 815 aaKnown RBP eCLIP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 USP14P54578 494 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 CALCOCO2Q13137 446 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 TCP11X2Q5H9J9 407 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 LCMT1Q9UIC8 334 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 ZNF652Q9Y2D9 606 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 ESYT3A0FGR9 886 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 TRIM49BA6NDI0 452 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 PPP1R2P41236 205 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 USPL1Q5W0Q7 1092 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 KSR1Q8IVT5 923 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 KRIT1O00522 736 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms