RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ADCYAP1R1P41586 468 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 TFAP4Q01664 338 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 PPARAQ07869 468 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 ZMYM1Q5SVZ6 1142 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 SLFN13Q68D06 897 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 LRRC47Q8N1G4 583 aaKnown RBP11.34□□□□□ -0.59
CLN6-203ENST00000563917 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 NEDD1Q8NHV4 660 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 RLFQ13129 1914 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 FRMPD3Q5JV73 1810 aa11.34□□□□□ -0.59
CLN6-203ENST00000563917 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
CLN6-203ENST00000563917 ATP2A1O14983 1001 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 IGHA2P01877 340 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 SLC1A4P43007 532 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 STAT2P52630 851 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 OAZ1P54368 228 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 LRRC41Q15345 812 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 ZNF792Q3KQV3 632 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 FAM47AQ5JRC9 791 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 FAM160B2Q86V87 743 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 REPS2Q8NFH8 660 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 FERMT2Q96AC1 680 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 SEC62Q99442 399 aaKnown RBP11.33□□□□□ -0.6
CLN6-203ENST00000563917 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
CLN6-203ENST00000563917 TOMM22Q9NS69 142 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
CLN6-203ENST00000563917 ZNFX1Q9P2E3 1918 aaKnown RBP11.33□□□□□ -0.6
CLN6-203ENST00000563917 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
CLN6-203ENST00000563917 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
CLN6-203ENST00000563917 IGKV6D-41A0A0C4DH26 115 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 TMEM232C9JQI7 657 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 AAMPQ13685 434 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 NUP133Q8WUM0 1156 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 SLC38A10Q9HBR0 1119 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
CLN6-203ENST00000563917 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 RANBP6O60518 1105 aaKnown RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 PGK1P00558 417 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 MFAP1P55081 439 aaKnown RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 TICAM2Q86XR7 235 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 OTUD7AQ8TE49 926 aaPredicted RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 VTI1AQ96AJ9 217 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 ABHD16BQ9H3Z7 469 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 HELLSQ9NRZ9 838 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 HOMER2Q9NSB8 354 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 TACC3Q9Y6A5 838 aa11.31□□□□□ -0.6
CLN6-203ENST00000563917 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
CLN6-203ENST00000563917 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 CLTBP09497 229 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
CLN6-203ENST00000563917 RAG1P15918 1043 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 MCCP23508 829 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 TLE2Q04725 743 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 HDAC1Q13547 482 aaPredicted RBP11.3□□□□□ -0.6
CLN6-203ENST00000563917 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 SNX17Q15036 470 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 MAMDC4Q6UXC1 1216 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
CLN6-203ENST00000563917 PCSK9Q8NBP7 692 aaKnown RBP11.3□□□□□ -0.6
CLN6-203ENST00000563917 GLT1D1Q96MS3 346 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 RWDD1Q9H446 243 aaPredicted RBP11.3□□□□□ -0.6
CLN6-203ENST00000563917 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
CLN6-203ENST00000563917 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 MOXD2PA6NHM9 499 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 ASB14A6NK59 587 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 PQBP1O60828 265 aaKnown RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 TAL1P17542 331 aaPredicted RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 PDE1AP54750 535 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms