RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 AGMOQ6ZNB7 445 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 USP50Q70EL3 339 aaPredicted RBP7.5□□□□□ -1.21
TCF4-220ENST00000563824 SAPCD2Q86UD0 394 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 RTKN2Q8IZC4 609 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
TCF4-220ENST00000563824 IRF7Q92985 503 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 NKD1Q969G9 470 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 NT5C1AQ9BXI3 368 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 UBP1Q9NZI7 540 aa7.5□□□□□ -1.21
TCF4-220ENST00000563824 FZD9O00144 591 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 DLL1O00548 723 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 ARAFP10398 606 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 TFE3P19532 575 aaPredicted RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 GSK3AP49840 483 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 COL9A2Q14055 689 aaPredicted RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 CCDC144BQ3MJ40 725 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 CCDC93Q567U6 631 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 CST9Q5W186 159 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 INTS5Q6P9B9 1019 aaKnown RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 CTU1Q7Z7A3 348 aaKnown RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 MASTLQ96GX5 879 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 MIR1-1HGQ9H1L0 117 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
TCF4-220ENST00000563824 SOS1Q07889 1333 aaPredicted RBP7.49□□□□□ -1.21
TCF4-220ENST00000563824 A0A087WZG4 1122 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 H3BM21 787 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 FYB1O15117 783 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 AOC2O75106 756 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 MAP2K3P46734 347 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 GRM1Q13255 1194 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 AMOTQ4VCS5 1084 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 PSAPL1Q6NUJ1 521 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 TRIM42Q8IWZ5 723 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 OSBPL2Q9H1P3 480 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 KCNQ5Q9NR82 932 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 SOX13Q9UN79 622 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
TCF4-220ENST00000563824 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 TLR3O15455 904 aaKnown RBP7.47□□□□□ -1.21
TCF4-220ENST00000563824 BPNT1O95861 308 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 B3GALT4O96024 378 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 GARTP22102 1010 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 NME2P22392 152 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 FBLN1P23142 703 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 FXR1P51114 621 aaKnown RBP eCLIP7.47□□□□□ -1.21
TCF4-220ENST00000563824 RBL2Q08999 1139 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 LRRC14Q15048 493 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 CIAPIN1Q6FI81 312 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 LLGL2Q6P1M3 1020 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 JDP2Q8WYK2 163 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 JARID2Q92833 1246 aaPredicted RBP7.47□□□□□ -1.21
TCF4-220ENST00000563824 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 EMILIN2Q9BXX0 1053 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 R3HCC1Q9Y3T6 440 aaKnown RBP7.47□□□□□ -1.21
TCF4-220ENST00000563824 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 RNF123Q5XPI4 1314 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 ANKRD31Q8N7Z5 1873 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 ANKRD26Q9UPS8 1709 aa7.47□□□□□ -1.21
TCF4-220ENST00000563824 COL15A1P39059 1388 aa7.46□□□□□ -1.21
TCF4-220ENST00000563824 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.21
TCF4-220ENST00000563824 AKAP11Q9UKA4 1901 aa7.46□□□□□ -1.21
TCF4-220ENST00000563824 SLX4Q8IY92 1834 aa7.46□□□□□ -1.21
TCF4-220ENST00000563824 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 SRGNP10124 158 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 ALAS2P22557 587 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 CANXP27824 592 aaKnown RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 CDC27P30260 824 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 MCM4P33991 863 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 EIF6P56537 245 aaKnown RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 ST5P78524 1137 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 SEPT6Q14141 434 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 IKBKEQ14164 716 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 CWF19L2Q2TBE0 894 aaKnown RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 SEZ6Q53EL9 994 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 PLEKHO1Q53GL0 409 aaPredicted RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 BNC2Q6ZN30 1099 aaPredicted RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 NOP9Q86U38 636 aaKnown RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
TCF4-220ENST00000563824 PCDHB5Q9Y5E4 795 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 TJP1Q07157 1748 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 ZNF541Q9H0D2 1346 aa7.46□□□□□ -1.22
TCF4-220ENST00000563824 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
TCF4-220ENST00000563824 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
TCF4-220ENST00000563824 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
TCF4-220ENST00000563824 GREM1O60565 184 aa7.45□□□□□ -1.22
TCF4-220ENST00000563824 RGS9O75916 674 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms