RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 ZMYM5Q9UJ78 669 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 ZNF214Q9UL59 606 aaPredicted RBP6.17□□□□□ -1.42
GDE1-202ENST00000563645 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 ZNF205O95201 554 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 GSNP06396 782 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 TCF3P15923 654 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 KIR2DL1P43626 348 aaPredicted RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 KIR2DL2P43627 348 aaPredicted RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 KSR1Q8IVT5 923 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 SHDQ96IW2 340 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 FAM84AQ96KN4 292 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 FCRL2Q96LA5 508 aaPredicted RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 NSUN3Q9H649 340 aaKnown RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 CWC22Q9HCG8 908 aaKnown RBP6.16□□□□□ -1.42
GDE1-202ENST00000563645 STRIP2Q9ULQ0 834 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 LTBP3Q9NS15 1303 aa6.16□□□□□ -1.42
GDE1-202ENST00000563645 A0A1W2PQH9 124 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 TP53P04637 393 aaPredicted RBP6.15□□□□□ -1.42
GDE1-202ENST00000563645 ERCC5P28715 1186 aaPredicted RBP6.15□□□□□ -1.42
GDE1-202ENST00000563645 PKN1Q16512 942 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 ZPBP2Q6X784 338 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 CPLX3Q8WVH0 158 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 ZNF428Q96B54 188 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 HHIPL1Q96JK4 782 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 DIRC2Q96SL1 478 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 SLC38A3Q99624 504 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 SLC6A17Q9H1V8 727 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 PHAXQ9H814 394 aaKnown RBP6.15□□□□□ -1.42
GDE1-202ENST00000563645 GP6Q9HCN6 339 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 FAM86C1Q9NVL1 165 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 GPR160Q9UJ42 338 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 FHOD1Q9Y613 1164 aa6.15□□□□□ -1.42
GDE1-202ENST00000563645 ZNF445P59923 1031 aa6.14□□□□□ -1.43
GDE1-202ENST00000563645 SNX17Q15036 470 aa6.14□□□□□ -1.43
GDE1-202ENST00000563645 IRF2BP1Q8IU81 584 aa6.14□□□□□ -1.43
GDE1-202ENST00000563645 FBXO15Q8NCQ5 510 aaPredicted RBP6.14□□□□□ -1.43
GDE1-202ENST00000563645 BHLHE22Q8NFJ8 381 aaPredicted RBP6.14□□□□□ -1.43
GDE1-202ENST00000563645 INTS4Q96HW7 963 aaKnown RBP6.14□□□□□ -1.43
GDE1-202ENST00000563645 YBX2Q9Y2T7 364 aaKnown RBP6.14□□□□□ -1.43
GDE1-202ENST00000563645 NOTOA8MTQ0 251 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 H0Y8X5 98 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 NRDCO43847 1150 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 PSPNO60542 156 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 ITGA4P13612 1032 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 VAV1P15498 845 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 CD247P20963 164 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 SLC14A2Q15849 920 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 GNPTABQ3T906 1256 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 NOL9Q5SY16 702 aaKnown RBP6.13□□□□□ -1.43
GDE1-202ENST00000563645 CWF19L1Q69YN2 538 aaKnown RBP6.13□□□□□ -1.43
GDE1-202ENST00000563645 CEP128Q6ZU80 1094 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 NLRX1Q86UT6 975 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 KRTAP1-3Q8IUG1 177 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 SHISA4Q96DD7 197 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 PPP1R16BQ96T49 567 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 HAUS7Q99871 368 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 CDADC1Q9BWV3 514 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 DCP1AQ9NPI6 582 aaPredicted RBP6.13□□□□□ -1.43
GDE1-202ENST00000563645 ERVK13-1Q9NX77 482 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 TNFRSF10DQ9UBN6 386 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 GPR55Q9Y2T6 319 aaPredicted RBP6.13□□□□□ -1.43
GDE1-202ENST00000563645 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
GDE1-202ENST00000563645 ATF4P18848 351 aaPredicted RBP6.12□□□□□ -1.43
GDE1-202ENST00000563645 CASP7P55210 303 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 ZNF124Q15973 351 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 RTP2Q5QGT7 225 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 FIBCD1Q8N539 461 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 FAM169BQ8N8A8 192 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 BRF1Q92994 677 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 KLHL25Q9H0H3 589 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 WHRNQ9P202 907 aa6.12□□□□□ -1.43
GDE1-202ENST00000563645 FADS2P1A8MWK0 482 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 TSPAN15O95858 294 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 EFEMP2O95967 443 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
GDE1-202ENST00000563645 PPP2R5EQ16537 467 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
GDE1-202ENST00000563645 KLHL6Q8WZ60 621 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 GBP3Q9H0R5 595 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
GDE1-202ENST00000563645 AP5S1Q9NUS5 200 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 PCDHB10Q9UN67 800 aa6.11□□□□□ -1.43
GDE1-202ENST00000563645 SF3B6Q9Y3B4 125 aaKnown RBP6.11□□□□□ -1.43
GDE1-202ENST00000563645 A0A087WZG4 1122 aa6.1□□□□□ -1.43
GDE1-202ENST00000563645 GSTM1P09488 218 aa6.1□□□□□ -1.43
GDE1-202ENST00000563645 CEBPAP49715 358 aaPredicted RBP6.1□□□□□ -1.43
GDE1-202ENST00000563645 GALK1P51570 392 aa6.1□□□□□ -1.43
GDE1-202ENST00000563645 RTP1P59025 263 aa6.1□□□□□ -1.43
GDE1-202ENST00000563645 HSF5Q4G112 596 aaPredicted RBP6.1□□□□□ -1.43
GDE1-202ENST00000563645 HEATR6Q6AI08 1181 aaKnown RBP6.1□□□□□ -1.43
GDE1-202ENST00000563645 SLCO6A1Q86UG4 719 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms