RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 IL17RBQ9NRM6 502 aa29.39■■■□□ 2.3
PPP4C-206ENST00000563597 CTDP1Q9Y5B0 961 aaPredicted RBP29.39■■■□□ 2.3
PPP4C-206ENST00000563597 TACC3Q9Y6A5 838 aa29.39■■■□□ 2.3
PPP4C-206ENST00000563597 SLC34A2O95436 690 aa29.38■■■□□ 2.29
PPP4C-206ENST00000563597 CYBAP13498 195 aa29.38■■■□□ 2.29
PPP4C-206ENST00000563597 SNRNP48Q6IEG0 339 aaKnown RBP29.38■■■□□ 2.29
PPP4C-206ENST00000563597 MAML3Q96JK9 1138 aa29.38■■■□□ 2.29
PPP4C-206ENST00000563597 C11orf49Q9H6J7 331 aa29.38■■■□□ 2.29
PPP4C-206ENST00000563597 DIAPH3Q9NSV4 1193 aa29.38■■■□□ 2.29
PPP4C-206ENST00000563597 DDX20Q9UHI6 824 aaKnown RBP29.38■■■□□ 2.29
PPP4C-206ENST00000563597 CNGA1P29973 690 aa29.37■■■□□ 2.29
PPP4C-206ENST00000563597 SLC38A10Q9HBR0 1119 aa29.37■■■□□ 2.29
PPP4C-206ENST00000563597 TOMM22Q9NS69 142 aa29.37■■■□□ 2.29
PPP4C-206ENST00000563597 ZNFX1Q9P2E3 1918 aaKnown RBP29.37■■■□□ 2.29
PPP4C-206ENST00000563597 FDX1P10109 184 aa29.36■■■□□ 2.29
PPP4C-206ENST00000563597 PCP11498 1178 aaKnown RBP29.36■■■□□ 2.29
PPP4C-206ENST00000563597 SLC1A4P43007 532 aa29.36■■■□□ 2.29
PPP4C-206ENST00000563597 STAT2P52630 851 aa29.36■■■□□ 2.29
PPP4C-206ENST00000563597 IRX6P78412 446 aaPredicted RBP29.36■■■□□ 2.29
PPP4C-206ENST00000563597 FRMPD3Q5JV73 1810 aa29.36■■■□□ 2.29
PPP4C-206ENST00000563597 NMT2O60551 498 aa29.35■■■□□ 2.29
PPP4C-206ENST00000563597 NOVP48745 357 aa29.35■■■□□ 2.29
PPP4C-206ENST00000563597 OAZ1P54368 228 aa29.35■■■□□ 2.29
PPP4C-206ENST00000563597 HABP4Q5JVS0 413 aaKnown RBP29.35■■■□□ 2.29
PPP4C-206ENST00000563597 CWC27Q6UX04 472 aaKnown RBP29.35■■■□□ 2.29
PPP4C-206ENST00000563597 TRPV1Q8NER1 839 aa29.35■■■□□ 2.29
PPP4C-206ENST00000563597 CHURC1Q8WUH1 139 aa29.35■■■□□ 2.29
PPP4C-206ENST00000563597 DIS3Q9Y2L1 958 aaKnown RBP29.35■■■□□ 2.29
PPP4C-206ENST00000563597 TMEM232C9JQI7 657 aa29.34■■■□□ 2.29
PPP4C-206ENST00000563597 FAM160B2Q86V87 743 aa29.34■■■□□ 2.29
PPP4C-206ENST00000563597 CPXCR1Q8N123 301 aa29.34■■■□□ 2.29
PPP4C-206ENST00000563597 ISY1Q9ULR0 285 aaKnown RBP29.34■■■□□ 2.29
PPP4C-206ENST00000563597 PGK2P07205 417 aa29.33■■■□□ 2.29
PPP4C-206ENST00000563597 MCCP23508 829 aa29.33■■■□□ 2.29
PPP4C-206ENST00000563597 HAND2P61296 217 aa29.33■■■□□ 2.29
PPP4C-206ENST00000563597 RRP12Q5JTH9 1297 aaKnown RBP29.33■■■□□ 2.29
PPP4C-206ENST00000563597 COLQQ9Y215 455 aaPredicted RBP29.33■■■□□ 2.29
PPP4C-206ENST00000563597 RIPK3Q9Y572 518 aa29.33■■■□□ 2.29
PPP4C-206ENST00000563597 ALPK3Q96L96 1907 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 PLA2G6O60733 806 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 COL6A1P12109 1028 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 IKQ13123 557 aaPredicted RBP29.32■■■□□ 2.28
PPP4C-206ENST00000563597 ZNF792Q3KQV3 632 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 AKNAD1Q5T1N1 836 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 MFSD6Q6ZSS7 791 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 STAG1Q8WVM7 1258 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 RNF41Q9H4P4 317 aaPredicted RBP29.32■■■□□ 2.28
PPP4C-206ENST00000563597 RAVER2Q9HCJ3 691 aaKnown RBP29.32■■■□□ 2.28
PPP4C-206ENST00000563597 TCP11L1Q9NUJ3 509 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 NRBP1Q9UHY1 535 aa29.32■■■□□ 2.28
PPP4C-206ENST00000563597 PFASO15067 1338 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 SEPT4O43236 478 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 PDE4AP27815 886 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 RCSD1Q6JBY9 416 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.31■■■□□ 2.28
PPP4C-206ENST00000563597 FBXO40Q9UH90 709 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 PLXNA1Q9UIW2 1896 aa29.31■■■□□ 2.28
PPP4C-206ENST00000563597 DDX11Q96FC9 970 aa29.3■■■□□ 2.28
PPP4C-206ENST00000563597 TINF2Q9BSI4 451 aa29.3■■■□□ 2.28
PPP4C-206ENST00000563597 ZNF213O14771 459 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 SLC4A3P48751 1232 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 NT5C2P49902 561 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 CHRDL2Q6WN34 429 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 CHST13Q8NET6 341 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 DCAF4Q8WV16 495 aa29.29■■■□□ 2.28
PPP4C-206ENST00000563597 RANBP2P49792 3224 aaKnown RBP29.28■■■□□ 2.28
PPP4C-206ENST00000563597 TOP1P11387 765 aaKnown RBP29.28■■■□□ 2.28
PPP4C-206ENST00000563597 PRAMEF19Q5SWL8 479 aa29.28■■■□□ 2.28
PPP4C-206ENST00000563597 TTC22Q5TAA0 569 aa29.28■■■□□ 2.28
PPP4C-206ENST00000563597 KCTD1Q719H9 257 aa29.28■■■□□ 2.28
PPP4C-206ENST00000563597 TBC1D10CQ8IV04 446 aa29.28■■■□□ 2.28
PPP4C-206ENST00000563597 MSL3Q8N5Y2 521 aaKnown RBP29.28■■■□□ 2.28
PPP4C-206ENST00000563597 DSCC1Q9BVC3 393 aa29.28■■■□□ 2.28
PPP4C-206ENST00000563597 LAMA4Q16363 1823 aa29.27■■■□□ 2.28
PPP4C-206ENST00000563597 DNAJC25-GNG10A0A024R161 153 aa29.27■■■□□ 2.28
PPP4C-206ENST00000563597 DNM1LO00429 736 aa29.27■■■□□ 2.28
PPP4C-206ENST00000563597 ESR2Q92731 530 aa29.27■■■□□ 2.28
PPP4C-206ENST00000563597 GSPT1P15170 499 aaKnown RBP29.26■■■□□ 2.27
PPP4C-206ENST00000563597 C7orf61Q8IZ16 206 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 ANKRD35Q8N283 1001 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 ARRDC4Q8NCT1 418 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 CHMP4CQ96CF2 233 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 TTC14Q96N46 770 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 TMEM47Q9BQJ4 181 aa29.26■■■□□ 2.27
PPP4C-206ENST00000563597 CCDC96Q2M329 555 aa29.25■■■□□ 2.27
PPP4C-206ENST00000563597 MTMR7Q9Y216 660 aa29.25■■■□□ 2.27
PPP4C-206ENST00000563597 DNAH12Q6ZR08 3092 aa29.25■■■□□ 2.27
PPP4C-206ENST00000563597 TRIOBPQ9H2D6 2365 aa29.25■■■□□ 2.27
PPP4C-206ENST00000563597 RASGRP2Q7LDG7 609 aa29.24■■■□□ 2.27
PPP4C-206ENST00000563597 ZNF467Q7Z7K2 595 aaPredicted RBP29.24■■■□□ 2.27
PPP4C-206ENST00000563597 CTNNA3Q9UI47 895 aa29.24■■■□□ 2.27
PPP4C-206ENST00000563597 PRR12Q9ULL5 1215 aa29.24■■■□□ 2.27
PPP4C-206ENST00000563597 CNPY2Q9Y2B0 182 aa29.24■■■□□ 2.27
PPP4C-206ENST00000563597 ZNF536O15090 1300 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 NEDD4P46934 1319 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 SYNGAP1Q96PV0 1343 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 TKFCQ3LXA3 575 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 ANO1Q5XXA6 986 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 MAMDC4Q6UXC1 1216 aa29.23■■■□□ 2.27
PPP4C-206ENST00000563597 PRO3102Q9H379 93 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms