RNA–Protein interactions for RNA: ENST00000563517.5

TUBGCP4-206, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-206ENST00000563517 SLC16A2P36021 539 aa20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 CCT2P78371 535 aaKnown RBP20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 SYDE2Q5VT97 1194 aa20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 SMCR8Q8TEV9 937 aaPredicted RBP20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 PPP1R9AQ9ULJ8 1098 aa20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 CTDP1Q9Y5B0 961 aaPredicted RBP20.9■□□□□ 0.94
TUBGCP4-206ENST00000563517 MYPNQ86TC9 1320 aa20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 DSG3P32926 999 aa20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 TAF1CQ15572 869 aaPredicted RBP20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 ME3Q16798 604 aa20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 BTNL9Q6UXG8 535 aa20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 P2RX7Q99572 595 aaKnown RBP20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 UBA5Q9GZZ9 404 aa20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 SH2B1Q9NRF2 756 aaPredicted RBP20.89■□□□□ 0.93
TUBGCP4-206ENST00000563517 CPLX1O14810 134 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 PFKFB2O60825 505 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 CYP2C8P10632 490 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 HERVK_113P62684 666 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 CPLX2Q6PUV4 134 aaKnown RBP20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 DNAJC5GQ8N7S2 189 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 GTF3C2Q8WUA4 911 aaPredicted RBP20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 ZFYVE28Q9HCC9 887 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 PRR12Q9ULL5 1215 aa20.88■□□□□ 0.93
TUBGCP4-206ENST00000563517 NID2Q14112 1375 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 ZBED4O75132 1171 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 CD2BP2O95400 341 aaKnown RBP20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 FDX1P10109 184 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 SMARCA1P28370 1054 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 CDC27P30260 824 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 ADD1P35611 737 aaKnown RBP20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 MAP2K1Q02750 393 aaPredicted RBP20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 TMTC3Q6ZXV5 915 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 BEGAINQ9BUH8 593 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 NCOA5Q9HCD5 579 aaKnown RBP20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
TUBGCP4-206ENST00000563517 SPDYE16A6NNV3 312 aaPredicted RBP20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 PLEKHA8P1O95397 391 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 GCLCP48506 637 aaPredicted RBP20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 SCRN1Q12765 414 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 ADGRF4Q8IZF3 695 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 CCDC82Q8N4S0 544 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 SRBD1Q8N5C6 995 aaKnown RBP20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 MB21D1Q8N884 522 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 ATG4CQ96DT6 458 aa20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 FAM217BQ9NTX9 383 aaPredicted RBP20.86■□□□□ 0.93
TUBGCP4-206ENST00000563517 VWA5AO00534 786 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 CA12O43570 354 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 LARGE1O95461 756 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 HSCBQ8IWL3 235 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 GTF3C6Q969F1 213 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 SNX21Q969T3 373 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 TMX3Q96JJ7 454 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 SPZ1Q9BXG8 430 aa20.85■□□□□ 0.93
TUBGCP4-206ENST00000563517 CDKL5O76039 1030 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 NBPF11Q86T75 865 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 RRP36Q96EU6 259 aaKnown RBP20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 PAGR1Q9BTK6 254 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 RIOX1Q9H6W3 641 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 RNF186Q9NXI6 227 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 THSD7BQ9C0I4 1608 aa20.84■□□□□ 0.93
TUBGCP4-206ENST00000563517 TRPA1O75762 1119 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 CRHR2Q13324 411 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 HOMER1Q86YM7 354 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 CCDC83Q8IWF9 413 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 PIBF1Q8WXW3 757 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 RANBP17Q9H2T7 1088 aaKnown RBP20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 SLC38A10Q9HBR0 1119 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 SEC63Q9UGP8 760 aaKnown RBP20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 RABGAP1Q9Y3P9 1069 aa20.83■□□□□ 0.93
TUBGCP4-206ENST00000563517 CYTH3O43739 400 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 TLR2O60603 784 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 IFNAR1P17181 557 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 SNAP25P60880 206 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 CDC37Q16543 378 aaPredicted RBP20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 CCDC174Q6PII3 467 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 TRIM22Q8IYM9 498 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 PNMA2Q9UL42 364 aa20.82■□□□□ 0.92
TUBGCP4-206ENST00000563517 K7ELQ4 463 aaPredicted RBP20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 SSRP1Q08945 709 aaKnown RBP20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 PLS1Q14651 629 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 ANKRD13CQ8N6S4 541 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 GPRC5AQ8NFJ5 357 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 PIGSQ96S52 555 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 SLC26A6Q9BXS9 759 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 SAGE1Q9NXZ1 904 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 RBPJLQ9UBG7 517 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 CPA4Q9UI42 421 aa20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 V9GY48 417 aaPredicted RBP20.81■□□□□ 0.92
TUBGCP4-206ENST00000563517 CNTNAP5Q8WYK1 1306 aa20.8■□□□□ 0.92
TUBGCP4-206ENST00000563517 PNMA6FA0A0J9YX94 578 aa20.8■□□□□ 0.92
TUBGCP4-206ENST00000563517 ZBTB5O15062 677 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms