RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 RAG1P15918 1043 aa22.37■■□□□ 1.17
NME3-204ENST00000563498 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
NME3-204ENST00000563498 DNAJC25-GNG10A0A024R161 153 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 MOXD2PA6NHM9 499 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 F5H6K3 240 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 PQBP1O60828 265 aaKnown RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 RASA1P20936 1047 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 KLRC3Q07444 240 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.36■■□□□ 1.17
NME3-204ENST00000563498 ZNF467Q7Z7K2 595 aaPredicted RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 PRPF38AQ8NAV1 312 aaKnown RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 MAFAQ8NHW3 353 aaPredicted RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 RNPC3Q96LT9 517 aaKnown RBP22.36■■□□□ 1.17
NME3-204ENST00000563498 FAM184BQ9ULE4 1060 aa22.36■■□□□ 1.17
NME3-204ENST00000563498 SYNRGQ9UMZ2 1314 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 SNAI1O95863 264 aaPredicted RBP22.35■■□□□ 1.17
NME3-204ENST00000563498 NDUFB10O96000 172 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 ACLYP53396 1101 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 EPHB4P54760 987 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 FPGSQ05932 587 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 KLHDC9Q8NEP7 349 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 LENG1Q96BZ8 264 aaPredicted RBP22.35■■□□□ 1.17
NME3-204ENST00000563498 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 NUP88Q99567 741 aaPredicted RBP22.35■■□□□ 1.17
NME3-204ENST00000563498 MKNK2Q9HBH9 465 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 ECHDC1Q9NTX5 307 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 TMEM39AQ9NV64 488 aa22.35■■□□□ 1.17
NME3-204ENST00000563498 GSG1L2A8MUP6 293 aa22.34■■□□□ 1.17
NME3-204ENST00000563498 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
NME3-204ENST00000563498 FAAP100Q0VG06 881 aa22.34■■□□□ 1.17
NME3-204ENST00000563498 SYNPO2Q9UMS6 1093 aa22.34■■□□□ 1.17
NME3-204ENST00000563498 RIPK3Q9Y572 518 aa22.34■■□□□ 1.17
NME3-204ENST00000563498 IGKV6D-41A0A0C4DH26 115 aa22.33■■□□□ 1.17
NME3-204ENST00000563498 DUSP11O75319 330 aaKnown RBP22.33■■□□□ 1.17
NME3-204ENST00000563498 CST5P28325 142 aaPredicted RBP22.33■■□□□ 1.17
NME3-204ENST00000563498 CCSAPQ6IQ19 270 aaPredicted RBP22.33■■□□□ 1.17
NME3-204ENST00000563498 KBTBD3Q8NAB2 608 aa22.33■■□□□ 1.17
NME3-204ENST00000563498 MYLIPQ8WY64 445 aa22.33■■□□□ 1.17
NME3-204ENST00000563498 ZNF287Q9HBT7 754 aa22.33■■□□□ 1.17
NME3-204ENST00000563498 ELP1O95163 1332 aa22.32■■□□□ 1.16
NME3-204ENST00000563498 ZBED4O75132 1171 aa22.32■■□□□ 1.16
NME3-204ENST00000563498 APPBP2Q92624 585 aa22.32■■□□□ 1.16
NME3-204ENST00000563498 MKL1Q969V6 931 aa22.32■■□□□ 1.16
NME3-204ENST00000563498 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
NME3-204ENST00000563498 EYSQ5T1H1 3165 aa22.32■■□□□ 1.16
NME3-204ENST00000563498 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 FOSL2P15408 326 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 GNAT2P19087 354 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 OAZ1P54368 228 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 KCNA10Q16322 511 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 OSBP2Q969R2 916 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 SLC38A10Q9HBR0 1119 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 CLIP2Q9UDT6 1046 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 FBXO40Q9UH90 709 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 CDH23Q9H251 3354 aa22.31■■□□□ 1.16
NME3-204ENST00000563498 SMARCA5O60264 1052 aaPredicted RBP22.3■■□□□ 1.16
NME3-204ENST00000563498 TIMP1P01033 207 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 ZFYP08048 801 aaPredicted RBP22.3■■□□□ 1.16
NME3-204ENST00000563498 ACVR2BQ13705 512 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 CPXCR1Q8N123 301 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 PCSK9Q8NBP7 692 aaKnown RBP22.3■■□□□ 1.16
NME3-204ENST00000563498 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 CHST13Q8NET6 341 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 GLT1D1Q96MS3 346 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.3■■□□□ 1.16
NME3-204ENST00000563498 FEM1BQ9UK73 627 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 TBX21Q9UL17 535 aa22.3■■□□□ 1.16
NME3-204ENST00000563498 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
NME3-204ENST00000563498 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 RNF113AO15541 343 aaKnown RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 ZNF444Q8N0Y2 327 aaPredicted RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 STK11IPQ8N1F8 1099 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 ANKRD35Q8N283 1001 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 KIFC2Q96AC6 838 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 GPATCH3Q96I76 525 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 UPF3AQ9H1J1 476 aaKnown RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 EPB41L4AQ9HCS5 686 aaPredicted RBP22.29■■□□□ 1.16
NME3-204ENST00000563498 MTMR4Q9NYA4 1195 aa22.29■■□□□ 1.16
NME3-204ENST00000563498 MYH4Q9Y623 1939 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 GPAA1O43292 621 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 FDX1P10109 184 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 CDK7P50613 346 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 CEP95Q96GE4 821 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 FGD4Q96M96 766 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 RAVER2Q9HCJ3 691 aaKnown RBP22.28■■□□□ 1.16
NME3-204ENST00000563498 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
NME3-204ENST00000563498 VCANP13611 3396 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 PLIN4Q96Q06 1357 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 MYADML2A6NDP7 307 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 TTLL1O95922 423 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 ASGR1P07306 291 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 C6orf222P0C671 652 aaPredicted RBP22.27■■□□□ 1.16
NME3-204ENST00000563498 DNAJB2P25686 324 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms