RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 STXBP4Q6ZWJ1 553 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 CCDC25Q86WR0 208 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 DYDC2Q96IM9 177 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 PHF23Q9BUL5 403 aaPredicted RBP6.86□□□□□ -1.31
CLK3-212ENST00000563418 BHMT2Q9H2M3 363 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 ARIH1Q9Y4X5 557 aaPredicted RBP6.86□□□□□ -1.31
CLK3-212ENST00000563418 ZNF521Q96K83 1311 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 GRID2IPA4D2P6 1211 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 TBCAO75347 108 aaKnown RBP6.86□□□□□ -1.31
CLK3-212ENST00000563418 BAG2O95816 211 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 CYFIP2Q96F07 1278 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 CCDC28BQ9BUN5 200 aa6.86□□□□□ -1.31
CLK3-212ENST00000563418 PDE5AO76074 875 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 GAS8O95995 478 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 SERPINB6P35237 376 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 USP5P45974 858 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 DNM2P50570 870 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 NAA30Q147X3 362 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 LGSNQ5TDP6 509 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 CXorf38Q8TB03 319 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 SEPT10Q9P0V9 454 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 C11orf57Q6ZUT1 292 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 SIKE1Q9BRV8 207 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 CTNND2Q9UQB3 1225 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 DKC1O60832 514 aaKnown RBP eCLIP6.85□□□□□ -1.31
CLK3-212ENST00000563418 CA8P35219 290 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 VHLP40337 213 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 RHPN1Q8TCX5 695 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 NEK9Q8TD19 979 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 FERMT1Q9BQL6 677 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 KBTBD12Q3ZCT8 623 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 PPP1R42Q7Z4L9 355 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 ANKRD35Q8N283 1001 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 KIFAP3Q92845 792 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 NAF1Q96HR8 494 aaKnown RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 DMAP1Q9NPF5 467 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 DNMT1P26358 1616 aaKnown RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 CD2BP2O95400 341 aaKnown RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 ANP32DO95626 131 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 CCZ1BP86790 482 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 CCZ1P86791 482 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 TBC1D8BQ0IIM8 1120 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 NLRP9Q7RTR0 991 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 ATXN10Q9UBB4 475 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 ARHGAP42A6NI28 874 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 ZNF213O14771 459 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 GNAT2P19087 354 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 BEND6Q5SZJ8 279 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 TTC1Q99614 292 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 C19orf44Q9H6X5 657 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 AMOTL2Q9Y2J4 779 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 CCDC194A0A1B0GVG4 234 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 RTN3O95197 1032 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 AFMP43652 599 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 RCN2Q14257 317 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 NANOGNBQ7Z5D8 188 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 PACSIN2Q9UNF0 486 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
CLK3-212ENST00000563418 HSPA6P17066 643 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 LRRC37BQ96QE4 947 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 POLR3EQ9NVU0 708 aa6.85□□□□□ -1.31
CLK3-212ENST00000563418 SPATA1Q5VX52 437 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 OLFML2BQ68BL8 750 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 CFAP36Q96G28 342 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 EPSTI1Q96J88 318 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 PBKQ96KB5 322 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 BTBD7Q9P203 1132 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 CDHR2Q9BYE9 1310 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 CCT8L1PA6NM43 557 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 KCNB1Q14721 858 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 C10orf76Q5T2E6 689 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 PDXDC1Q6P996 788 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 FAM81BQ96LP2 452 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 CCDC138Q96M89 665 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 NOC4LQ9BVI4 516 aaKnown RBP6.84□□□□□ -1.31
CLK3-212ENST00000563418 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 TTC21BQ7Z4L5 1316 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 P4HA2O15460 535 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 ATP4AP20648 1035 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 SERPINB10P48595 397 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 ARPC4P59998 168 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 KIAA2013Q8IYS2 634 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLK3-212ENST00000563418 EZH1Q92800 747 aaPredicted RBP6.84□□□□□ -1.31
CLK3-212ENST00000563418 PLAAQ9Y263 795 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 ABCC5O15440 1437 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 KRIT1O00522 736 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.31
CLK3-212ENST00000563418 EEF1DP29692 281 aaKnown RBP6.84□□□□□ -1.31
CLK3-212ENST00000563418 MSH2P43246 934 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 MAGEA1P43355 309 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 CNNM2Q9H8M5 875 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 AGBL2Q5U5Z8 902 aa6.84□□□□□ -1.31
CLK3-212ENST00000563418 ANO5Q75V66 913 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms