RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SIP14410 1827 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 DUSP11O75319 330 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 SLC25A27O95847 323 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 SNAI1O95863 264 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 FGBP02675 491 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 ASGR1P07306 291 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 EVX2Q03828 476 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 SIAH1Q8IUQ4 282 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 SLC43A3Q8NBI5 491 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 GLT1D1Q96MS3 346 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 MMP19Q99542 508 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 TANGO6Q9C0B7 1094 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 PIH1D3Q9NQM4 214 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 PCDHA11Q9Y5I1 949 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 LCTP09848 1927 aa9.46□□□□□ -0.9
HERPUD1-206ENST00000563343 USP34Q70CQ2 3546 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 TRIOO75962 3097 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 PRR33A8MZF0 331 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 IGSF3O75054 1194 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 NKX3-2P78367 333 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 NHLH1Q02575 133 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 PLS1Q14651 629 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 MAMDC4Q6UXC1 1216 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 RIOX2Q8IUF8 465 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 REPS2Q8NFH8 660 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 WNT8AQ9H1J5 351 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 ZNF214Q9UL59 606 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 FAM184BQ9ULE4 1060 aa9.45□□□□□ -0.9
HERPUD1-206ENST00000563343 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 APBB1O00213 710 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 FLOT1O75955 427 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 CYP7A1P22680 504 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 ZAP70P43403 619 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 GJA9P57773 515 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 MSL3Q8N5Y2 521 aaKnown RBP9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 FGD4Q96M96 766 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 DBNDD2Q9BQY9 259 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 TMX2Q9Y320 296 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 MYH4Q9Y623 1939 aa9.44□□□□□ -0.9
HERPUD1-206ENST00000563343 TRIP12Q14669 1992 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 ASTN1O14525 1302 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 TLR3O15455 904 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 LPXNO60711 386 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 CA3P07451 260 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 C6orf222P0C671 652 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 USP5P45974 858 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 KCTD2Q14681 263 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 ALDH1L2Q3SY69 923 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 CLEC10AQ8IUN9 316 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 MIGA1Q8NAN2 632 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 HLA-CQ95604 372 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 KATNBL1Q9H079 304 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 HIPK3Q9H422 1215 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 FBXO28Q9NVF7 368 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 HDAC5Q9UQL6 1122 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 CNPY2Q9Y2B0 182 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 SLC4A7Q9Y6M7 1214 aa9.43□□□□□ -0.9
HERPUD1-206ENST00000563343 PNMA6EA0A0J9YXQ4 647 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 VWA5AO00534 786 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 WDR46O15213 610 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 STAT3P40763 770 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 CCL23P55773 120 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 TAP1Q03518 808 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 SPICE1Q8N0Z3 855 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 RIOK1Q9BRS2 568 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 VCPKMTQ9H867 229 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 CERS4Q9HA82 394 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 MRS2Q9HD23 443 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 ZHX1Q9UKY1 873 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 MYH7P12883 1935 aa9.42□□□□□ -0.9
HERPUD1-206ENST00000563343 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 CFAP54Q96N23 3096 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 KMT2EQ8IZD2 1858 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 ATP2A2P16615 1042 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 GRB10Q13322 594 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 ACVR2BQ13705 512 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 TTLL4Q14679 1199 aa9.41□□□□□ -0.9
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