RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 CHST3Q7LGC8 479 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 RIOX2Q8IUF8 465 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 SHCBP1Q8NEM2 672 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 SH3TC2Q8TF17 1288 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
UBR1-204ENST00000563239 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 ZNF536O15090 1300 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 FRMPD2Q68DX3 1309 aaPredicted RBP10.04□□□□□ -0.8
UBR1-204ENST00000563239 CCDC85CA6NKD9 419 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 IGHA2P01877 340 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 ELNP15502 786 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 SLC16A2P36021 539 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 STAT3P40763 770 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 STAT2P52630 851 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 SNAP25P60880 206 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 ZNF543Q08ER8 600 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 TRDNQ13061 729 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 GRB14Q14449 540 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 PLS1Q14651 629 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 ADCK5Q3MIX3 580 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 PNMA1Q8ND90 353 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 RAET1EQ8TD07 263 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 CHURC1Q8WUH1 139 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 UBAC1Q9BSL1 405 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 KAT14Q9H8E8 782 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
UBR1-204ENST00000563239 GPCPD1Q9NPB8 672 aa10.03□□□□□ -0.8
UBR1-204ENST00000563239 SLC15A5A6NIM6 579 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 IFIT3O14879 490 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 PRC1O43663 620 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 ADCY3O60266 1144 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 COBLO75128 1261 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 ZBED4O75132 1171 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 GOLGA8HP0CJ92 632 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 XRCC5P13010 732 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 GRK4P32298 578 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 HSPA4P34932 840 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 EXOSC10Q01780 885 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 CCDC96Q2M329 555 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 SLC9C1Q4G0N8 1177 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 IFIT1BQ5T764 474 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 RALYLQ86SE5 291 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 USP26Q9BXU7 913 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.81
UBR1-204ENST00000563239 CPVLQ9H3G5 476 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 MROH8Q9H579 483 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 LY9Q9HBG7 655 aa10.02□□□□□ -0.81
UBR1-204ENST00000563239 ZNF236Q9UL36 1845 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SH2B2O14492 632 aaPredicted RBP10.01□□□□□ -0.81
UBR1-204ENST00000563239 STRNO43815 780 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SLC25A27O95847 323 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 HOXC6P09630 235 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 FDX1P10109 184 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 TAL1P17542 331 aaPredicted RBP10.01□□□□□ -0.81
UBR1-204ENST00000563239 CYP2B6P20813 491 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 OAZ1P54368 228 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 TROAPQ12815 778 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 TRIM32Q13049 653 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 MTFR1Q15390 333 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 CCL14Q16627 93 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SYDE2Q5VT97 1194 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 WDR78Q5VTH9 848 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SNRNP48Q6IEG0 339 aaKnown RBP10.01□□□□□ -0.81
UBR1-204ENST00000563239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBR1-204ENST00000563239 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 ABRAQ8N0Z2 381 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 CPXCR1Q8N123 301 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 STAG2Q8N3U4 1231 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 NPLOC4Q8TAT6 608 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 SOCS4Q8WXH5 440 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 TRIB2Q92519 343 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 UBA5Q9GZZ9 404 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 FLRT1Q9NZU1 646 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 MAD2L2Q9UI95 211 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
UBR1-204ENST00000563239 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
UBR1-204ENST00000563239 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
UBR1-204ENST00000563239 EPB41L2O43491 1005 aaKnown RBP10□□□□□ -0.81
UBR1-204ENST00000563239 REC8O95072 547 aa10□□□□□ -0.81
UBR1-204ENST00000563239 INHAP05111 366 aa10□□□□□ -0.81
UBR1-204ENST00000563239 ADORA2AP29274 412 aa10□□□□□ -0.81
UBR1-204ENST00000563239 MCM5P33992 734 aa10□□□□□ -0.81
UBR1-204ENST00000563239 RGS2P41220 211 aa10□□□□□ -0.81
UBR1-204ENST00000563239 SOX10P56693 466 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms