RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ATP2B1P20020 1258 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 GLDCP23378 1020 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 GUCY2CP25092 1073 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 GBP1P32455 592 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 CASP7P55210 303 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 CLEC16AQ2KHT3 1053 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 TIGD5Q53EQ6 642 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 TNNI3KQ59H18 835 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 FBXW10Q5XX13 1052 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 ATG14Q6ZNE5 492 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 LCNL1Q6ZST4 164 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 AMIGO3Q86WK7 504 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 FAM169BQ8N8A8 192 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 ZNF408Q9H9D4 720 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 CWC22Q9HCG8 908 aaKnown RBP5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 EBF1Q9UH73 591 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 NPIPB6E9PJ23 425 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 UBOX5O94941 541 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 RAG1P15918 1043 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 ETFBP38117 255 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 TEKQ02763 1124 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 CHRNEQ04844 493 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 DUSP4Q13115 394 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 SNX17Q15036 470 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 IRF2BP1Q8IU81 584 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 LINC01599Q8WXQ3 324 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 DRC1Q96MC2 740 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 SLC9A7Q96T83 725 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 PRKAG3Q9UGI9 489 aa5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 YBX2Q9Y2T7 364 aaKnown RBP5.08□□□□□ -1.6
SHCBP1-202ENST00000563219 A0A1W2PQH9 124 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 ZSCAN22P10073 491 aaPredicted RBP5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 CHMP4BP1P59074 171 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 RNF4P78317 190 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 RBL2Q08999 1139 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 NMIQ13287 307 aaPredicted RBP5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 KCNA10Q16322 511 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 RUFY4Q6ZNE9 571 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 USHBP1Q8N6Y0 703 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 DAGLBQ8NCG7 672 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 SYTL5Q8TDW5 730 aaPredicted RBP5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 ASCC2Q9H1I8 757 aaPredicted RBP5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 SLC6A17Q9H1V8 727 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 SMG5Q9UPR3 1016 aaKnown RBP5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 SLC12A7Q9Y666 1083 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 MRVI1Q9Y6F6 885 aa5.07□□□□□ -1.6
SHCBP1-202ENST00000563219 TCAF2A6NFQ2 919 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 SMAD7O15105 426 aaKnown RBP5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 PSPNO60542 156 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 STK10O94804 968 aaKnown RBP5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 POLR2BP30876 1174 aaKnown RBP5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 NBPF9Q3BBW0 867 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 NBPF12Q5TAG4 269 aaPredicted RBP5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 UNC5AQ6ZN44 842 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 RNF111Q6ZNA4 994 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 SHISA4Q96DD7 197 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 G6PC3Q9BUM1 346 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 ZNF552Q9H707 407 aaPredicted RBP5.06□□□□□ -1.6
SHCBP1-202ENST00000563219 NOTOA8MTQ0 251 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 KLF4O43474 513 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 PEX10O60683 326 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 RPL10P27635 214 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 ZYXQ15942 572 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 NBPF6Q5VWK0 638 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 TMEM192Q8IY95 271 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 ZNF655Q8N720 491 aaPredicted RBP5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 UBXN4Q92575 508 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 INTS4Q96HW7 963 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 DHRS1Q96LJ7 313 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 NBPF4Q96M43 638 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 SLC6A18Q96N87 628 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 HIRIP3Q9BW71 556 aaPredicted RBP5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 MCOLN1Q9GZU1 580 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 ACTR10Q9NZ32 417 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 GPR160Q9UJ42 338 aa5.05□□□□□ -1.6
SHCBP1-202ENST00000563219 LTBP3Q9NS15 1303 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 MYOCOSA0A1B0GUC4 107 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 CLEC3AO75596 197 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 GTF2F1P35269 517 aaKnown RBP eCLIP5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 PMS1P54277 932 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 DLG4P78352 724 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 CIAPIN1Q6FI81 312 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 ANKS3Q6ZW76 656 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 ZNF605Q86T29 641 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 CKAP2LQ8IYA6 745 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 LINC00116Q8NCU8 138 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 TCTN2Q96GX1 697 aa5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 PHAXQ9H814 394 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 SUCOQ9UBS9 1254 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 ZNF214Q9UL59 606 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-202ENST00000563219 SEMA7AO75326 666 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 PDE6BP35913 854 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 KIR2DL1P43626 348 aaPredicted RBP5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms