RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 APOBRQ0VD83 1088 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 SEZ6Q53EL9 994 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 FBLN7Q53RD9 439 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
SMG1-206ENST00000562668 CYB5RLQ6IPT4 315 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 NLRC3Q7RTR2 1065 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 SPPL2CQ8IUH8 684 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
SMG1-206ENST00000562668 ZSCAN18Q8TBC5 510 aaPredicted RBP7.32□□□□□ -1.24
SMG1-206ENST00000562668 G6PC3Q9BUM1 346 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 EBF1Q9UH73 591 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 ZNF281Q9Y2X9 895 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 ABCA8O94911 1581 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 GLDCP23378 1020 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 CCNFP41002 786 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 TMC3Q7Z5M5 1100 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 DAGLBQ8NCG7 672 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 LINC01599Q8WXQ3 324 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 ATG4CQ96DT6 458 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 INTS4Q96HW7 963 aaKnown RBP7.31□□□□□ -1.24
SMG1-206ENST00000562668 GPR160Q9UJ42 338 aa7.31□□□□□ -1.24
SMG1-206ENST00000562668 YBX2Q9Y2T7 364 aaKnown RBP7.31□□□□□ -1.24
SMG1-206ENST00000562668 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 PTPRGP23470 1445 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 TCAF2A6NFQ2 919 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 MEIS3P2A8K0S8 358 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 CLEC3AO75596 197 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 CLCQ05315 142 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
SMG1-206ENST00000562668 ATG14Q6ZNE5 492 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 ZNF655Q8N720 491 aaPredicted RBP7.3□□□□□ -1.24
SMG1-206ENST00000562668 TCTN2Q96GX1 697 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 FOXP3Q9BZS1 431 aa7.3□□□□□ -1.24
SMG1-206ENST00000562668 ABCC2Q92887 1545 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 NPIPB6E9PJ23 425 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 ETV2O00321 342 aaPredicted RBP7.29□□□□□ -1.24
SMG1-206ENST00000562668 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
SMG1-206ENST00000562668 ZNF165P49910 485 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
SMG1-206ENST00000562668 SNX17Q15036 470 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 KCNA10Q16322 511 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 LCNL1Q6ZST4 164 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 SLITRK4Q8IW52 837 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 NT5C1AQ9BXI3 368 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 TCFL5Q9UL49 500 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 PLB1Q6P1J6 1458 aa7.29□□□□□ -1.24
SMG1-206ENST00000562668 FHOD3Q2V2M9 1422 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 LOC105371045A0A1W2PR82 267 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 TMEM82A0PJX8 343 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 USP2O75604 605 aaPredicted RBP7.28□□□□□ -1.24
SMG1-206ENST00000562668 PRAMEF1O95521 474 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 NME1P15531 152 aaKnown RBP7.28□□□□□ -1.24
SMG1-206ENST00000562668 MCM4P33991 863 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 LRRFIP1Q32MZ4 808 aaKnown RBP7.28□□□□□ -1.24
SMG1-206ENST00000562668 BBS9Q3SYG4 887 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 NKD1Q969G9 470 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 MAP6Q96JE9 813 aa7.28□□□□□ -1.24
SMG1-206ENST00000562668 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
SMG1-206ENST00000562668 UACAQ9BZF9 1416 aa7.27□□□□□ -1.24
SMG1-206ENST00000562668 KDM5BQ9UGL1 1544 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 TNFRSF10CO14798 259 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 PSPNO60542 156 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 SYPP08247 313 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
SMG1-206ENST00000562668 LDLRAD1Q5T700 205 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 ZNF605Q86T29 641 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 TMEM87AQ8NBN3 555 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 LINC00116Q8NCU8 138 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 SHISA4Q96DD7 197 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 MCOLN1Q9GZU1 580 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 PRDM14Q9GZV8 571 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 ANTXR1Q9H6X2 564 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 ZMYM5Q9UJ78 669 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 LRRIQ1Q96JM4 1722 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 RAPGEF6Q8TEU7 1601 aa7.27□□□□□ -1.25
SMG1-206ENST00000562668 SSU72P8A0A1W2PR75 194 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 NOTOA8MTQ0 251 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 PEX10O60683 326 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 FKTNO75072 461 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 SEMA7AO75326 666 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 ZSCAN22P10073 491 aaPredicted RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 PDE6BP35913 854 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 NLRX1Q86UT6 975 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 SIAH1Q8IUQ4 282 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 TMEM192Q8IY95 271 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 KCNN1Q92952 543 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 EAF1Q96JC9 268 aaPredicted RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 SLC6A18Q96N87 628 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 SPON2Q9BUD6 331 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 MKRN2Q9H000 416 aaKnown RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 SMG5Q9UPR3 1016 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms