RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CLCN1P35523 988 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 SERTAD1Q9UHV2 236 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 MTX1Q13505 466 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 KCTD2Q14681 263 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 MGARPQ8TDB4 240 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 TRIM56Q9BRZ2 755 aaKnown RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 MIS12Q9H081 205 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 RAB17Q9H0T7 212 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 SGSM2O43147 1006 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 GYG1P46976 350 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 DMP1Q13316 513 aaPredicted RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 NUB1Q9Y5A7 615 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 TLR3O15455 904 aaKnown RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 BTDP43251 543 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 PDE6CP51160 858 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.435e-7■■■■■ 38.3
RPAP1-204ENST00000562303 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PHBP35232 272 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 POLA2Q14181 598 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 RFC1P35251 1148 aaPredicted RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 GBP7Q8N8V2 638 aaPredicted RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PANK4Q9NVE7 773 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 GOLGA8CPA6NN73 597 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 CSPG5O95196 566 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 CMTR1Q8N1G2 835 aaKnown RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 DSCC1Q9BVC3 393 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 SAT1P21673 171 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 ADCY8P40145 1251 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 CCNA1P78396 465 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PNOCQ13519 176 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 C10orf67Q8IYJ2 551 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 PARD3BQ8TEW8 1205 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 IQCDQ96DY2 449 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 CHMP6Q96FZ7 201 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 DDX25Q9UHL0 483 aaKnown RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 GOLGA8HP0CJ92 632 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
RPAP1-204ENST00000562303 ZNF75DP51815 510 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 TFDP1Q14186 410 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■■■□ 19.6
RPAP1-204ENST00000562303 GRK7Q8WTQ7 553 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
RPAP1-204ENST00000562303 IMPACTQ9P2X3 320 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
RPAP1-204ENST00000562303 PRAG1Q86YV5 1406 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 KRT3P12035 628 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 IL13P35225 146 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 KRT71Q3SY84 523 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 POMGNT1Q8WZA1 660 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 BCAP29Q9UHQ4 241 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
RPAP1-204ENST00000562303 JAK2O60674 1132 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 TSNAXIP1Q2TAA8 658 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 RYBPQ8N488 228 aaPredicted RBP12.35□□□□□ -0.43
RPAP1-204ENST00000562303 ARHGAP6O43182 974 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 TROVE2P10155 538 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPAP1-204ENST00000562303 OSBPP22059 807 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 STX2P32856 288 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 PHLDB2Q86SQ0 1253 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 SDR42E1Q8WUS8 393 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
RPAP1-204ENST00000562303 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
RPAP1-204ENST00000562303 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 ABCB5Q2M3G0 1257 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 S100BP04271 92 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms