RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 SPTBN5Q9NRC6 3674 aaKnown RBP12.31□□□□□ -0.44
BBS4-205ENST00000562219 MYO9BQ13459 2157 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 FOSL2P15408 326 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 EPHB4P54760 987 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 FPGSQ05932 587 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
BBS4-205ENST00000562219 ANKRD33Q7Z3H0 272 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 TOX2Q96NM4 488 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
BBS4-205ENST00000562219 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
BBS4-205ENST00000562219 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 ACLYP53396 1101 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 NUP88Q99567 741 aaPredicted RBP12.3□□□□□ -0.44
BBS4-205ENST00000562219 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
BBS4-205ENST00000562219 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 TMEM39AQ9NV64 488 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 NYAP2Q9P242 653 aa12.3□□□□□ -0.44
BBS4-205ENST00000562219 LCTP09848 1927 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 DCDC2CA8MYV0 355 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 F5H6K3 240 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 ATP2A1O14983 1001 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 DUSP11O75319 330 aaKnown RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 SNAI1O95863 264 aaPredicted RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 NDUFB10O96000 172 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 RASA1P20936 1047 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 KLRC3Q07444 240 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 FAAP100Q0VG06 881 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 SBK1Q52WX2 424 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 DDX11Q96FC9 970 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 STRBPQ96SI9 672 aaKnown RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
BBS4-205ENST00000562219 FAM184BQ9ULE4 1060 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
BBS4-205ENST00000562219 DNAJB2P25686 324 aa12.28□□□□□ -0.44
BBS4-205ENST00000562219 CST5P28325 142 aaPredicted RBP12.28□□□□□ -0.44
BBS4-205ENST00000562219 CCSAPQ6IQ19 270 aaPredicted RBP12.28□□□□□ -0.44
BBS4-205ENST00000562219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
BBS4-205ENST00000562219 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
BBS4-205ENST00000562219 TBX21Q9UL17 535 aa12.28□□□□□ -0.44
BBS4-205ENST00000562219 ELP1O95163 1332 aa12.28□□□□□ -0.44
BBS4-205ENST00000562219 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 GSG1L2A8MUP6 293 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 MINDY4BA8MYZ0 360 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 ZBED4O75132 1171 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 TIMP1P01033 207 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
BBS4-205ENST00000562219 KCNA10Q16322 511 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 CPXCR1Q8N123 301 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 PCSK9Q8NBP7 692 aaKnown RBP12.27□□□□□ -0.45
BBS4-205ENST00000562219 GLT1D1Q96MS3 346 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 FBXO40Q9UH90 709 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 CTDP1Q9Y5B0 961 aaPredicted RBP12.27□□□□□ -0.45
BBS4-205ENST00000562219 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
BBS4-205ENST00000562219 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
BBS4-205ENST00000562219 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
BBS4-205ENST00000562219 ADCY6O43306 1168 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 SMARCA5O60264 1052 aaPredicted RBP12.26□□□□□ -0.45
BBS4-205ENST00000562219 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 OAZ1P54368 228 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 CCDC144BQ3MJ40 725 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 MFSD5Q6N075 450 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 MIER1Q8N108 512 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 STK11IPQ8N1F8 1099 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 KBTBD3Q8NAB2 608 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 APPBP2Q92624 585 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 GPATCH3Q96I76 525 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 FGD4Q96M96 766 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
BBS4-205ENST00000562219 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 ZNF287Q9HBT7 754 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
BBS4-205ENST00000562219 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
BBS4-205ENST00000562219 CHD9Q3L8U1 2897 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 ASGR1P07306 291 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 ZFYP08048 801 aaPredicted RBP12.25□□□□□ -0.45
BBS4-205ENST00000562219 GNAT2P19087 354 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms