RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PDHBP11177 359 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 FKBP1AP62942 108 aaKnown RBP11.15□□□□□ -0.62
SMG1-205ENST00000561947 CCZ1BP86790 482 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 CCZ1P86791 482 aaPredicted RBP11.15□□□□□ -0.62
SMG1-205ENST00000561947 DPYDQ12882 1025 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 IQUBQ8NA54 791 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 ENOX1Q8TC92 643 aaKnown RBP11.15□□□□□ -0.62
SMG1-205ENST00000561947 SERPINC1P01008 464 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 SHMT1P34896 483 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 UBASH3AP57075 661 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG1-205ENST00000561947 DHX8Q14562 1220 aaKnown RBP11.14□□□□□ -0.63
SMG1-205ENST00000561947 INF2Q27J81 1249 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 ASPRV1Q53RT3 343 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 CT47A1Q5JQC4 288 aaPredicted RBP11.14□□□□□ -0.63
SMG1-205ENST00000561947 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 ZDHHC15Q96MV8 337 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 PIGSQ96S52 555 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 UQCRHLA0A096LP55 91 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 UQCRHP07919 91 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 SKILP12757 684 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 GNA11P29992 359 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 STRIP1Q5VSL9 837 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 KRT25Q7Z3Z0 450 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
SMG1-205ENST00000561947 DPF2Q92785 391 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 GSDMAQ96QA5 445 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
SMG1-205ENST00000561947 FRMPD2Q68DX3 1309 aaPredicted RBP11.14□□□□□ -0.63
SMG1-205ENST00000561947 SMCO2A6NFE2 343 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ECE2O60344 883 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 TTLL1O95922 423 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ERCC5P28715 1186 aaPredicted RBP11.13□□□□□ -0.63
SMG1-205ENST00000561947 TXLNAP40222 546 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 NFIAQ12857 509 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 DACT2Q5SW24 774 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ZNF713Q8N859 430 aaPredicted RBP11.13□□□□□ -0.63
SMG1-205ENST00000561947 UBA5Q9GZZ9 404 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 EHD4Q9H223 541 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 VAT1LQ9HCJ6 419 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 LAD1O00515 517 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ZNF18P17022 549 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 CASP1P29466 404 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 CFAP100Q494V2 611 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 CLEC10AQ8IUN9 316 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 TMEM60Q9H2L4 133 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
SMG1-205ENST00000561947 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
SMG1-205ENST00000561947 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
SMG1-205ENST00000561947 CHRNA5P30532 468 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
SMG1-205ENST00000561947 HDLBPQ00341 1268 aaKnown RBP11.12□□□□□ -0.63
SMG1-205ENST00000561947 NONOQ15233 471 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMG1-205ENST00000561947 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
SMG1-205ENST00000561947 MED15Q96RN5 788 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 PRPHP41219 470 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 MYRIPQ8NFW9 859 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
SMG1-205ENST00000561947 SFPQP23246 707 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMG1-205ENST00000561947 CUL4BQ13620 913 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 STAMQ92783 540 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 MTRQ99707 1265 aa11.12□□□□□ -0.63
SMG1-205ENST00000561947 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 STAT6P42226 847 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 TPD52L1Q16890 204 aaPredicted RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 NEK8Q86SG6 692 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 REXO1Q8N1G1 1221 aaKnown RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 IDI2Q9BXS1 227 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 DISC1Q9NRI5 854 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 KCND1Q9NSA2 647 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 INTS13Q9NVM9 706 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 PCDHAC2Q9Y5I4 1007 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 PSME4Q14997 1843 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 MPHOSPH10O00566 681 aaKnown RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms