RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 ZBED4O75132 1171 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 BMP3P12645 472 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 SDSP20132 328 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 SNRNP48Q6IEG0 339 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 KIFC2Q96AC6 838 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 SLC38A10Q9HBR0 1119 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 DIS3Q9Y2L1 958 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 PGK2P07205 417 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 ZNF792Q3KQV3 632 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 GMCL1Q96IK5 515 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 PRO3102Q9H379 93 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 RIPK3Q9Y572 518 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CTDP1Q9Y5B0 961 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CEP290O15078 2479 aa20.53■□□□□ 0.88
MAP1LC3B-202ENST00000561823 SEPT4O43236 478 aa20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 NMT2O60551 498 aa20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 NOVP48745 357 aa20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CPXCR1Q8N123 301 aa20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 RBM27Q9P2N5 1060 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 COL11A1P12107 1806 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-202ENST00000561823 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 FDX1P10109 184 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 MCCP23508 829 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 SLC1A4P43007 532 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 STAT2P52630 851 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 OAZ1P54368 228 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 MFAP1P55081 439 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 C7orf61Q8IZ16 206 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 TINF2Q9BSI4 451 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
MAP1LC3B-202ENST00000561823 DNM1LO00429 736 aa20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 PLA2G6O60733 806 aa20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 FAM160B2Q86V87 743 aa20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 STAG1Q8WVM7 1258 aa20.5■□□□□ 0.87
MAP1LC3B-202ENST00000561823 DNAJC25-GNG10A0A024R161 153 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 SLC4A3P48751 1232 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 TOMM22Q9NS69 142 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 TCP11L1Q9NUJ3 509 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
MAP1LC3B-202ENST00000561823 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 HAND2P61296 217 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 LRRC26Q2I0M4 334 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 RRP12Q5JTH9 1297 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ANO1Q5XXA6 986 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 CWC27Q6UX04 472 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ARRDC4Q8NCT1 418 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 CHST13Q8NET6 341 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 DDX11Q96FC9 970 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 FBXO40Q9UH90 709 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ALPK3Q96L96 1907 aa20.48■□□□□ 0.87
MAP1LC3B-202ENST00000561823 HIP1O00291 1037 aa20.47■□□□□ 0.87
MAP1LC3B-202ENST00000561823 IKQ13123 557 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-202ENST00000561823 AKNAD1Q5T1N1 836 aa20.47■□□□□ 0.87
MAP1LC3B-202ENST00000561823 KCTD1Q719H9 257 aa20.47■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ZMYND8Q9ULU4 1186 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-202ENST00000561823 TAL1P17542 331 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-202ENST00000561823 GJC2Q5T442 439 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-202ENST00000561823 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ANKRD35Q8N283 1001 aa20.46■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ZNF536O15090 1300 aa20.46■□□□□ 0.87
MAP1LC3B-202ENST00000561823 ZNF865P0CJ78 1059 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 PDE4AP27815 886 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 MAMDC4Q6UXC1 1216 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 RASGRP2Q7LDG7 609 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 ZNF467Q7Z7K2 595 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 TBC1D10CQ8IV04 446 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 DCAF4Q8WV16 495 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 GDF15Q99988 308 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 TMEM47Q9BQJ4 181 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 FRMPD3Q5JV73 1810 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 SYNGAP1Q96PV0 1343 aa20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 ZNFX1Q9P2E3 1918 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-202ENST00000561823 A0A1W2PPC1 479 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 ZNF213O14771 459 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 SYN1P17600 705 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 AGBL1Q96MI9 1066 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 TTC14Q96N46 770 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 HOMER2Q9NSB8 354 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
MAP1LC3B-202ENST00000561823 CNPY2Q9Y2B0 182 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms