RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 PLEKHA8P1O95397 391 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 U2AF2P26368 475 aaKnown RBP eCLIP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 IARSP41252 1262 aaKnown RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 KRT85P78386 507 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 ZSCAN23Q3MJ62 389 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 KRT40Q6A162 431 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 ATL3Q6DD88 541 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 RSBN1LQ6PCB5 846 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 CPLX2Q6PUV4 134 aaKnown RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 SYNE3Q6ZMZ3 975 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 TMTC3Q6ZXV5 915 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 SH3BP5LQ7L8J4 393 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 KIAA0825Q8IV33 1275 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 PGBD1Q96JS3 809 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 USP28Q96RU2 1077 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 ALG1Q9BT22 464 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 OSBPL5Q9H0X9 879 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 TFIP11Q9UBB9 837 aaKnown RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 MYH6P13533 1939 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CCDC196A0A1B0GTZ2 297 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 TSPY2A6NKD2 308 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 NFKBIEO00221 500 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 PSMD14O00487 310 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CLSTN1O94985 981 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 DEXIO95424 95 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CALM1P0DP23 149 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CALM2P0DP24 149 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CALM3P0DP25 149 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 FECHP22830 423 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SHMT1P34896 483 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 PRELPP51888 382 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SSRP1Q08945 709 aaKnown RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 GRM4Q14833 912 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 NPY5RQ15761 445 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CCDC178Q5BJE1 867 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SOGA3Q5TF21 947 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SPRYD7Q5W111 196 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CAVIN1Q6NZI2 390 aaKnown RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 BRAPQ7Z569 592 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CATIPQ7Z7H3 387 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SCUBE3Q8IX30 993 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SRBD1Q8N5C6 995 aaKnown RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 ZBED3Q96IU2 234 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 TMEM47Q9BQJ4 181 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SLC26A6Q9BXS9 759 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 FTOQ9C0B1 505 aaKnown RBP eCLIP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 SCAND2PQ9GZW5 306 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 EHD4Q9H223 541 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 DNAJC18Q9H819 358 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 MKNK2Q9HBH9 465 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 RBM28Q9NW13 759 aaKnown RBP7.57□□□□□ -1.2
CAPN3-210ENST00000561817 RTEL1Q9NZ71 1219 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 RNF181Q9P0P0 153 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 ATRNL1Q5VV63 1379 aa7.57□□□□□ -1.2
CAPN3-210ENST00000561817 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 DDTLA6NHG4 134 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 GPR37O15354 613 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 SLURP2P0DP57 97 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 AKR1B1P15121 316 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 VEGFAP15692 232 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 NASPP49321 788 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 KCNA1Q09470 495 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 PICALMQ13492 652 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 CSPP1Q1MSJ5 1256 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 CFAP100Q494V2 611 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 MYSM1Q5VVJ2 828 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF598Q86UK7 904 aaKnown RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 AMOTL1Q8IY63 956 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 MTMR14Q8NCE2 650 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 PNMA1Q8ND90 353 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 NUP133Q8WUM0 1156 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 EMID1Q96A84 441 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 PRMT6Q96LA8 375 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 MAD2L2Q9UI95 211 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 ISY1Q9ULR0 285 aaKnown RBP7.56□□□□□ -1.2
CAPN3-210ENST00000561817 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
CAPN3-210ENST00000561817 LTBP3Q9NS15 1303 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 MYH8P13535 1937 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CYTH3O43739 400 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 ENTPD3O75355 529 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 RAD17O75943 681 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 MMP1P03956 469 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 TSPY3P0CV98 308 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 TSPY8P0CW00 308 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 SNHG28P0DPA3 235 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 LIG1P18858 919 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms