RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PTGISQ16647 500 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 LONRF3Q496Y0 759 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 TTMPQ5BVD1 217 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 EMC10Q5UCC4 262 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 MYCBPAPQ8TBZ2 947 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 CCDC51Q96ER9 411 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 ZBTB1Q9Y2K1 713 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 PPP1R37O75864 691 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 ACRBPQ8NEB7 543 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 HAUS2Q9NVX0 235 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 LIN7AO14910 233 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 BUB1BO60566 1050 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 SMNDC1O75940 238 aaKnown RBP eCLIP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 SND1Q7KZF4 910 aaKnown RBP eCLIP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 TRIM74Q86UV6 250 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 TRIM73Q86UV7 250 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 GSPT2Q8IYD1 628 aaKnown RBP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 NSMCE1Q8WV22 266 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 MMS19Q96T76 1030 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 PSMD1Q99460 953 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 SAMSN1Q9NSI8 373 aaKnown RBP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 CHCHD3Q9NX63 227 aaKnown RBP20.79■□□□□ 0.92
RAB40C-206ENST00000561781 RIPOR2Q9Y4F9 1068 aa20.79■□□□□ 0.92
RAB40C-206ENST00000561781 A0A0G2JLW4 131 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 FOXN1O15353 648 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 TEX33O43247 280 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 HSF2BPO75031 334 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-206ENST00000561781 CRKLP46109 303 aaKnown RBP20.78■□□□□ 0.92
RAB40C-206ENST00000561781 CWF19L2Q2TBE0 894 aaKnown RBP20.78■□□□□ 0.92
RAB40C-206ENST00000561781 CRELD2Q6UXH1 353 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-206ENST00000561781 MFN1Q8IWA4 741 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 TRIM58Q8NG06 486 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 ZMYND10O75800 440 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 MYL6BP14649 208 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 KIF23Q02241 960 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-206ENST00000561781 MTA1Q13330 715 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 IQCEQ6IPM2 695 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 SLC30A9Q6PML9 568 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 SAR1BQ9Y6B6 198 aa20.78■□□□□ 0.92
RAB40C-206ENST00000561781 ACCSLQ4AC99 568 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 CCDC181Q5TID7 509 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 CCDC102BQ68D86 513 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 TMTC1Q8IUR5 882 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 CNGA4Q8IV77 575 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 ARL8AQ96BM9 186 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 A0A1B0GTH6 734 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 E7EWF7 191 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 PSMD14O00487 310 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 FECHP22830 423 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 THEMIS2Q5TEJ8 643 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 ENOX1Q8TC92 643 aaKnown RBP20.77■□□□□ 0.92
RAB40C-206ENST00000561781 KAZALD1Q96I82 304 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 SUCLG2Q96I99 432 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 PDGFDQ9GZP0 370 aaPredicted RBP20.77■□□□□ 0.92
RAB40C-206ENST00000561781 DACH1Q9UI36 760 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 MAP3K2Q9Y2U5 619 aa20.77■□□□□ 0.92
RAB40C-206ENST00000561781 MYH14Q7Z406 1995 aaKnown RBP20.77■□□□□ 0.91
RAB40C-206ENST00000561781 PPFIA2O75334 1257 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 ATP1A2P50993 1020 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 HDLBPQ00341 1268 aaKnown RBP20.76■□□□□ 0.91
RAB40C-206ENST00000561781 ANKRD20A8PQ5CZ79 823 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 RESP18Q5W5W9 173 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 P3H4Q92791 437 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 CUL5Q93034 780 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 C15orf41Q9Y2V0 281 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 NBPF26B4DH59 902 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 GNPATO15228 680 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 MFAP3LO75121 409 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 SETSIPP0DME0 302 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 NBPF15Q8N660 670 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 CCHCR1Q8TD31 782 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 RNPC3Q96LT9 517 aaKnown RBP20.76■□□□□ 0.91
RAB40C-206ENST00000561781 NOD2Q9HC29 1040 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 MAN1B1Q9UKM7 699 aa20.76■□□□□ 0.91
RAB40C-206ENST00000561781 FAM237AA0A1B0GTK4 181 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 ATP6V1G2O95670 118 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 NNTQ13423 1086 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
RAB40C-206ENST00000561781 CCDC125Q86Z20 511 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 MED15Q96RN5 788 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-206ENST00000561781 PPP6R2O75170 966 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 APBA1Q02410 837 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 WWC3Q9ULE0 1092 aa20.75■□□□□ 0.91
RAB40C-206ENST00000561781 MYO1EQ12965 1108 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 PDIA5Q14554 519 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 LACTB2Q53H82 288 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 SLC27A3Q5K4L6 730 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 CWF19L1Q69YN2 538 aaKnown RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 EHBP1Q8NDI1 1231 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 NUP133Q8WUM0 1156 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 KCNH3Q9ULD8 1083 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 DNM1LO00429 736 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 DNAJC8O75937 253 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 CASP14P31944 242 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 GUCY1A3Q02108 690 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms