RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 OLFM4Q6UX06 510 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 TRIM74Q86UV6 250 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 TRIM73Q86UV7 250 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 NCAPG2Q86XI2 1143 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 TMTC1Q8IUR5 882 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 GALNT15Q8N3T1 639 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 FSIP1Q8NA03 581 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 CAVIN3Q969G5 261 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 PPP1R14BQ96C90 147 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 ACSBG1Q96GR2 724 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 CCDC114Q96M63 670 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 MEIS3Q99687 375 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 KIF9Q9HAQ2 790 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 SENP2Q9HC62 589 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
CDH1-203ENST00000561751 ABCC6O95255 1503 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ITSN1Q15811 1721 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 GOLGA6L10A0A0M3HER8 536 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 C5orf60A6NFR6 353 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 PSMD14O00487 310 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ZNF202O95125 648 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 VIMP08670 466 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 PRKAR2BP31323 418 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 PAPOLAP51003 745 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 BLMHQ13867 455 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 LBRQ14739 615 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 SEPT2Q15019 361 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 WASHC4Q2M389 1173 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 CFAP100Q494V2 611 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 NAA35Q5VZE5 725 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 TRAPPC11Q7Z392 1133 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 SESTD1Q86VW0 696 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 MMGT1Q8N4V1 131 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 MREGQ8N565 214 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 TRIML1Q8N9V2 468 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 FAM81AQ8TBF8 368 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ENOX1Q8TC92 643 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 CUL5Q93034 780 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 LRRC59Q96AG4 307 aaKnown RBP8.13□□□□□ -1.11
CDH1-203ENST00000561751 EVI5LQ96CN4 794 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 NGLY1Q96IV0 654 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 HSD3B7Q9H2F3 369 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 GOLPH3LQ9H4A5 285 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ATP13A2Q9NQ11 1180 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 PCDHGC5Q9Y5F6 944 aa8.13□□□□□ -1.11
CDH1-203ENST00000561751 ANO9A1A5B4 782 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 HMGB1P1B2RPK0 211 aaPredicted RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 E7ENQ6 273 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 SIAH2O43255 324 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 PRC1O43663 620 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 CAND2O75155 1236 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 PHACTR2O75167 634 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 NPTXRO95502 500 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ALADP13716 330 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ABCD1P33897 745 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 EPHB4P54760 987 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 TRIM14Q14142 442 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 SAFB2Q14151 953 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH1-203ENST00000561751 SGSM1Q2NKQ1 1148 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 NUGGCQ68CJ6 796 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 CREB3L3Q68CJ9 461 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 TSHZ1Q6ZSZ6 1077 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 BZW1Q7L1Q6 419 aaKnown RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 FERMT3Q86UX7 667 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 CNGA4Q8IV77 575 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ZNF513Q8N8E2 541 aaPredicted RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 MLKLQ8NB16 471 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ANKRD24Q8TF21 1146 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ZNF473Q8WTR7 871 aaKnown RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 GPATCH3Q96I76 525 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 CTAGE1Q96RT6 745 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 TSPAN18Q96SJ8 248 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH1-203ENST00000561751 INCENPQ9NQS7 918 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ITGB1BP2Q9UKP3 347 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
CDH1-203ENST00000561751 C15orf41Q9Y2V0 281 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 NALCNQ8IZF0 1738 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 ATRNO75882 1429 aa8.12□□□□□ -1.11
CDH1-203ENST00000561751 LRP5O75197 1615 aa8.11□□□□□ -1.11
CDH1-203ENST00000561751 B4DLN1 442 aa8.11□□□□□ -1.11
CDH1-203ENST00000561751 STXBP3O00186 592 aa8.11□□□□□ -1.11
CDH1-203ENST00000561751 FYB1O15117 783 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms