RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 FLT3LGP49771 235 aa27.41■■□□□ 1.98
SMPD3-202ENST00000561749 SNAP25P60880 206 aa27.41■■□□□ 1.98
SMPD3-202ENST00000561749 WTAPQ15007 396 aa27.41■■□□□ 1.98
SMPD3-202ENST00000561749 SART3Q15020 963 aaKnown RBP27.41■■□□□ 1.98
SMPD3-202ENST00000561749 CPXCR1Q8N123 301 aa27.41■■□□□ 1.98
SMPD3-202ENST00000561749 RAET1EQ8TD07 263 aa27.41■■□□□ 1.98
SMPD3-202ENST00000561749 ZNFX1Q9P2E3 1918 aaKnown RBP27.41■■□□□ 1.98
SMPD3-202ENST00000561749 ZBED4O75132 1171 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 SNHG28P0DPA3 235 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 ERCC3P19447 782 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 MCM5P33992 734 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 PRMT2P55345 433 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 ZNF543Q08ER8 600 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 PLEKHH3Q7Z736 793 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 NCAPG2Q86XI2 1143 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 LRRC2Q9BYS8 371 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 RAVER2Q9HCJ3 691 aaKnown RBP27.4■■□□□ 1.98
SMPD3-202ENST00000561749 ZNF214Q9UL59 606 aaPredicted RBP27.4■■□□□ 1.98
SMPD3-202ENST00000561749 PRR12Q9ULL5 1215 aa27.4■■□□□ 1.98
SMPD3-202ENST00000561749 IGDCC4Q8TDY8 1250 aa27.39■■□□□ 1.98
SMPD3-202ENST00000561749 NEK1Q96PY6 1258 aa27.39■■□□□ 1.98
SMPD3-202ENST00000561749 SLC38A10Q9HBR0 1119 aa27.39■■□□□ 1.98
SMPD3-202ENST00000561749 SNX14Q9Y5W7 946 aa27.39■■□□□ 1.98
SMPD3-202ENST00000561749 SMCHD1A6NHR9 2005 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 STAT3P40763 770 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 TSGA10IPQ3SY00 556 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 KCNB2Q92953 911 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 TCEANC2Q96MN5 208 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 USP26Q9BXU7 913 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 CPVLQ9H3G5 476 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 GJD2Q9UKL4 321 aa27.38■■□□□ 1.97
SMPD3-202ENST00000561749 MYH6P13533 1939 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 PLA2G6O60733 806 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 KRT32Q14532 448 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 SYDE2Q5VT97 1194 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 SNRNP48Q6IEG0 339 aaKnown RBP27.37■■□□□ 1.97
SMPD3-202ENST00000561749 CCDC174Q6PII3 467 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 SHCBP1Q8NEM2 672 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 SH3TC2Q8TF17 1288 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 LY9Q9HBG7 655 aa27.37■■□□□ 1.97
SMPD3-202ENST00000561749 SH2B2O14492 632 aaPredicted RBP27.36■■□□□ 1.97
SMPD3-202ENST00000561749 CYP2B6P20813 491 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 SLC9C1Q4G0N8 1177 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 BTNL9Q6UXG8 535 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 RIOX2Q8IUF8 465 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 NUDT12Q9BQG2 462 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 UBA5Q9GZZ9 404 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 IVNS1ABPQ9Y6Y0 642 aa27.36■■□□□ 1.97
SMPD3-202ENST00000561749 PARP1P09874 1014 aaKnown RBP27.35■■□□□ 1.97
SMPD3-202ENST00000561749 CPA1P15085 419 aa27.35■■□□□ 1.97
SMPD3-202ENST00000561749 TMEM87BQ96K49 555 aa27.35■■□□□ 1.97
SMPD3-202ENST00000561749 JAKMIP1Q96N16 626 aaKnown RBP27.35■■□□□ 1.97
SMPD3-202ENST00000561749 TEX13BQ9BXU2 312 aa27.35■■□□□ 1.97
SMPD3-202ENST00000561749 RIPK3Q9Y572 518 aa27.35■■□□□ 1.97
SMPD3-202ENST00000561749 CCDC85CA6NKD9 419 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 ADCY3O60266 1144 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 CAPN15O75808 1086 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 SLC25A27O95847 323 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 ELNP15502 786 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 TAL1P17542 331 aaPredicted RBP27.34■■□□□ 1.97
SMPD3-202ENST00000561749 PTPREP23469 700 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 MORN1Q5T089 497 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 GPATCH4Q5T3I0 446 aaKnown RBP27.34■■□□□ 1.97
SMPD3-202ENST00000561749 NFXL1Q6ZNB6 911 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 MROH8Q9H579 483 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 ZNF236Q9UL36 1845 aa27.34■■□□□ 1.97
SMPD3-202ENST00000561749 SLC15A5A6NIM6 579 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 MYCP01106 439 aaPredicted RBP27.33■■□□□ 1.97
SMPD3-202ENST00000561749 GRK4P32298 578 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 ASPRV1Q53RT3 343 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 STAG2Q8N3U4 1231 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 SOCS4Q8WXH5 440 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 AGBL1Q96MI9 1066 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 MTA3Q9BTC8 594 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 MYL10Q9BUA6 226 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 PLXNA1Q9UIW2 1896 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 ZNF536O15090 1300 aa27.33■■□□□ 1.97
SMPD3-202ENST00000561749 ATP2A1O14983 1001 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 EPB41L2O43491 1005 aaKnown RBP27.32■■□□□ 1.96
SMPD3-202ENST00000561749 FDX1P10109 184 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 IRF5Q13568 498 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 DHX32Q7L7V1 743 aaKnown RBP27.32■■□□□ 1.96
SMPD3-202ENST00000561749 CATIPQ7Z7H3 387 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 NUP133Q8WUM0 1156 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 RANBP17Q9H2T7 1088 aaKnown RBP27.32■■□□□ 1.96
SMPD3-202ENST00000561749 HOMER2Q9NSB8 354 aa27.32■■□□□ 1.96
SMPD3-202ENST00000561749 OAZ1P54368 228 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 EXOSC10Q01780 885 aaKnown RBP27.31■■□□□ 1.96
SMPD3-202ENST00000561749 MAP2K5Q13163 448 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 GRB14Q14449 540 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 GRM4Q14833 912 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 RAB11FIP4Q86YS3 637 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 ZNF654Q8IZM8 581 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 USP6NLQ92738 828 aa27.31■■□□□ 1.96
SMPD3-202ENST00000561749 BIN2Q9UBW5 565 aaPredicted RBP27.31■■□□□ 1.96
SMPD3-202ENST00000561749 CCDC69A6NI79 296 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 SEC24BO95487 1268 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 ADORA2AP29274 412 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 RGS2P41220 211 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 TROAPQ12815 778 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms