RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 PPM1JQ5JR12 505 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 GK5Q6ZS86 529 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 CYFIP1Q7L576 1253 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 GMLQ99445 158 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 POLR3GLQ9BT43 218 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 PIDD1Q9HB75 910 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 PPP1R1BQ9UD71 204 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-220ENST00000561253 TACC3Q9Y6A5 838 aa8.09□□□□□ -1.11
LRRC28-220ENST00000561253 KIAA0232Q92628 1395 aa8.09□□□□□ -1.12
LRRC28-220ENST00000561253 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 EP400Q96L91 3159 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 BCL9LQ86UU0 1499 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
LRRC28-220ENST00000561253 ATP2B1P20020 1258 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 FBLN1P23142 703 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 ASPAP45381 313 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 PREPP48147 710 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 ETF1P62495 437 aaKnown RBP8.08□□□□□ -1.12
LRRC28-220ENST00000561253 Q6ZS46 218 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 TXNRD3Q86VQ6 643 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 REXO1Q8N1G1 1221 aaKnown RBP8.08□□□□□ -1.12
LRRC28-220ENST00000561253 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-220ENST00000561253 CPLX3Q8WVH0 158 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 DRC1Q96MC2 740 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 FERD3LQ96RJ6 166 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 STRIP2Q9ULQ0 834 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-220ENST00000561253 PCDHB14Q9Y5E9 798 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 NSD2O96028 1365 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 AATKQ6ZMQ8 1374 aa8.08□□□□□ -1.12
LRRC28-220ENST00000561253 COL18A1P39060 1754 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 KRBA1A5PL33 1030 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 FANCGO15287 622 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 USP11P51784 963 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 CLCQ05315 142 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 RING1Q06587 406 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 TTLL4Q14679 1199 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 FBXW10Q5XX13 1052 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 RNF214Q8ND24 703 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
LRRC28-220ENST00000561253 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 SMG6Q86US8 1419 aaKnown RBP8.06□□□□□ -1.12
LRRC28-220ENST00000561253 RNGTTO60942 597 aaKnown RBP8.06□□□□□ -1.12
LRRC28-220ENST00000561253 FGRP09769 529 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
LRRC28-220ENST00000561253 PLCG1P19174 1290 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 GRK4P32298 578 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 CHRNA4P43681 627 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 ZBTB37Q5TC79 503 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 ZNF507Q8TCN5 953 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 SSU72Q9NP77 194 aaKnown RBP8.06□□□□□ -1.12
LRRC28-220ENST00000561253 FAM105AQ9NUU6 356 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 CORINQ9Y5Q5 1042 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 ABCC6O95255 1503 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
LRRC28-220ENST00000561253 HTR3BO95264 441 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 PGRP06401 933 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 IMPDH2P12268 514 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 DDX10Q13206 875 aaKnown RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 UVSSAQ2YD98 709 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 CCDC81Q6ZN84 652 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 KCNH5Q8NCM2 988 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 FAM46AQ96IP4 442 aaKnown RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 COG3Q96JB2 828 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 YIPF2Q9BWQ6 316 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
LRRC28-220ENST00000561253 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
LRRC28-220ENST00000561253 AFF2P51816 1311 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 ATRNO75882 1429 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 PEAK1Q9H792 1746 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-220ENST00000561253 C1QTNF9BB2RNN3 333 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 ATE1O95260 518 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 RAB6AP20340 208 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
LRRC28-220ENST00000561253 RRS1Q15050 365 aaKnown RBP8.04□□□□□ -1.12
LRRC28-220ENST00000561253 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-220ENST00000561253 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 KCT2Q8NC54 265 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 MEGF10Q96KG7 1140 aa8.04□□□□□ -1.12
LRRC28-220ENST00000561253 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms