RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CTAGE5O15320 804 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 NR1I2O75469 434 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 EGFRP00533 1210 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 CAP2P40123 477 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 NAPAP54920 295 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 KLRC3Q07444 240 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 SHROOM1Q2M3G4 852 aaPredicted RBP19.62■□□□□ 0.73
HDDC3-206ENST00000561036 TBC1D10BQ4KMP7 808 aaPredicted RBP19.62■□□□□ 0.73
HDDC3-206ENST00000561036 TYW1BQ6NUM6 668 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 ADGRF4Q8IZF3 695 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 ENGASEQ8NFI3 743 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 SH2D4AQ9H788 454 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 JMJD4Q9H9V9 463 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 GRPEL1Q9HAV7 217 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 VAT1LQ9HCJ6 419 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 HACL1Q9UJ83 578 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 SBF1O95248 1867 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 FAM237AA0A1B0GTK4 181 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 ASNSP08243 561 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 RBM43Q6ZSC3 357 aaKnown RBP19.61■□□□□ 0.73
HDDC3-206ENST00000561036 HOMER1Q86YM7 354 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
HDDC3-206ENST00000561036 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
HDDC3-206ENST00000561036 TNMDQ9H2S6 317 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 TSPY26PQ9H489 355 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 GOLPH3LQ9H4A5 285 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 TMX2Q9Y320 296 aa19.61■□□□□ 0.73
HDDC3-206ENST00000561036 BAZ2BQ9UIF8 2168 aaKnown RBP19.61■□□□□ 0.73
HDDC3-206ENST00000561036 ZBTB5O15062 677 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 KINO60870 393 aaKnown RBP19.6■□□□□ 0.73
HDDC3-206ENST00000561036 NDUFB10O96000 172 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 PTPREP23469 700 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 SNW1Q13573 536 aaKnown RBP19.6■□□□□ 0.73
HDDC3-206ENST00000561036 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
HDDC3-206ENST00000561036 TTC38Q5R3I4 469 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 BTNL9Q6UXG8 535 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 KCTD1Q719H9 257 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 KRT25Q7Z3Z0 450 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 FMR1NBQ8N0W7 255 aaPredicted RBP19.6■□□□□ 0.73
HDDC3-206ENST00000561036 PCDHB6Q9Y5E3 794 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 PPP2R3BQ9Y5P8 575 aa19.6■□□□□ 0.73
HDDC3-206ENST00000561036 CCDC194A0A1B0GVG4 234 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 SMCO2A6NFE2 343 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 PHF20L1A8MW92 1017 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 BMP3P12645 472 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 MARCKSP29966 332 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-206ENST00000561036 DCAF15Q66K64 600 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 MIGA2Q7L4E1 593 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 CDAN1Q8IWY9 1227 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 GLT8D2Q9H1C3 349 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 PCDHA6Q9UN73 950 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 PCDHA8Q9Y5H6 950 aa19.59■□□□□ 0.73
HDDC3-206ENST00000561036 SRPRBQ9Y5M8 271 aaKnown RBP19.59■□□□□ 0.73
HDDC3-206ENST00000561036 A0A1W2PRG0 241 aa19.58■□□□□ 0.72
HDDC3-206ENST00000561036 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
HDDC3-206ENST00000561036 RESP18Q5W5W9 173 aa19.58■□□□□ 0.72
HDDC3-206ENST00000561036 FERMT2Q96AC1 680 aa19.58■□□□□ 0.72
HDDC3-206ENST00000561036 FBXO2Q9UK22 296 aaPredicted RBP19.58■□□□□ 0.72
HDDC3-206ENST00000561036 USP17L10C9JJH3 530 aa19.57■□□□□ 0.72
HDDC3-206ENST00000561036 CTNND1O60716 968 aaKnown RBP19.57■□□□□ 0.72
HDDC3-206ENST00000561036 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
HDDC3-206ENST00000561036 HPSEQ9Y251 543 aa19.57■□□□□ 0.72
HDDC3-206ENST00000561036 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 A0A1B0GVL5 298 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 PLA2G6O60733 806 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.722e-8■■■□□ 14.6
HDDC3-206ENST00000561036 ATP2B1P20020 1258 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 SLC16A2P36021 539 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 ADCY7P51828 1080 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 NDUFA8P51970 172 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 TRAF1Q13077 416 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 ORC2Q13416 577 aaPredicted RBP19.56■□□□□ 0.72
HDDC3-206ENST00000561036 SYDE2Q5VT97 1194 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 SHC4Q6S5L8 630 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 TEX2Q8IWB9 1127 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 FUCA2Q9BTY2 467 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 VCPKMTQ9H867 229 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 RIC8AQ9NPQ8 531 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 RNF181Q9P0P0 153 aa19.56■□□□□ 0.72
HDDC3-206ENST00000561036 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 RAD21O60216 631 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 PFKFB1P16118 471 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 ATP2C1P98194 919 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 NOM1Q5C9Z4 860 aaKnown RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 ANGEL2Q5VTE6 544 aaKnown RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 REXO1Q8N1G1 1221 aaKnown RBP19.55■□□□□ 0.72
HDDC3-206ENST00000561036 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 ACER1Q8TDN7 264 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 ZNF341Q9BYN7 854 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 FAM13BQ9NYF5 915 aa19.55■□□□□ 0.72
HDDC3-206ENST00000561036 ADAMTS3O15072 1205 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms