RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 RANBP17Q9H2T7 1088 aaKnown RBP14.13□□□□□ -0.15
IRF9-211ENST00000560852 RBM28Q9NW13 759 aaKnown RBP14.13□□□□□ -0.15
IRF9-211ENST00000560852 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
IRF9-211ENST00000560852 HPS5Q9UPZ3 1129 aa14.13□□□□□ -0.15
IRF9-211ENST00000560852 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 ZBTB43O43298 467 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 TRPA1O75762 1119 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 CNMDO75829 334 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 MCM2P49736 904 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 TEX2Q8IWB9 1127 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 NUP88Q99567 741 aaPredicted RBP14.12□□□□□ -0.15
IRF9-211ENST00000560852 BEGAINQ9BUH8 593 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 TANGO6Q9C0B7 1094 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
IRF9-211ENST00000560852 PRR12Q9ULL5 1215 aa14.12□□□□□ -0.15
IRF9-211ENST00000560852 RLFQ13129 1914 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 KLF18A0A0U1RQI7 1052 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 GPR25O00155 361 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 COPB2P35606 906 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 AK2P54819 239 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 NTRK3Q16288 839 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 SLC35G1Q2M3R5 365 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 TTBK2Q6IQ55 1244 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 STAG2Q8N3U4 1231 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 GPRC5AQ8NFJ5 357 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 CTCFLQ8NI51 663 aaPredicted RBP14.11□□□□□ -0.15
IRF9-211ENST00000560852 SMCR8Q8TEV9 937 aaPredicted RBP14.11□□□□□ -0.15
IRF9-211ENST00000560852 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 ATG4CQ96DT6 458 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 R3HDMLQ9H3Y0 253 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 TXNRD2Q9NNW7 524 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 ZNF536O15090 1300 aa14.11□□□□□ -0.15
IRF9-211ENST00000560852 CYTH3O43739 400 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 PFKFB2O60825 505 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 ZBED4O75132 1171 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 SLC25A27O95847 323 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 GNRH1P01148 92 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 ERVK-24P63145 666 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 FGD1P98174 961 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 APOBRQ0VD83 1088 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 TRAF1Q13077 416 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 TMEM132BQ14DG7 1078 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 Q3C1V9 767 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 TKFCQ3LXA3 575 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
IRF9-211ENST00000560852 JMJD4Q9H9V9 463 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 BTBD7Q9P203 1132 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 TPCN1Q9ULQ1 816 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 LIMCH1Q9UPQ0 1083 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 PCNTO95613 3336 aa14.1□□□□□ -0.15
IRF9-211ENST00000560852 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 IFNAR1P17181 557 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 CCNA1P78396 465 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 SP3Q02447 781 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 GHRHRQ02643 423 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 RASGRP2Q7LDG7 609 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 ADGRF4Q8IZF3 695 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 ABRAQ8N0Z2 381 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
IRF9-211ENST00000560852 SRBD1Q8N5C6 995 aaKnown RBP14.09□□□□□ -0.15
IRF9-211ENST00000560852 RGS22Q8NE09 1264 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 TEX13BQ9BXU2 312 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 SPATC1LQ9H0A9 340 aa14.09□□□□□ -0.15
IRF9-211ENST00000560852 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 STRNO43815 780 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 ST18O60284 1047 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 ICAM1P05362 532 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 GOLGA8HP0CJ92 632 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 CDC27P30260 824 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 MAPK4P31152 587 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 STAT3P40763 770 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 CTCFP49711 727 aaPredicted RBP14.08□□□□□ -0.16
IRF9-211ENST00000560852 METAP2P50579 478 aaKnown RBP eCLIP14.08□□□□□ -0.16
IRF9-211ENST00000560852 LACTBP83111 547 aaPredicted RBP14.08□□□□□ -0.16
IRF9-211ENST00000560852 RTN1Q16799 776 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 NBPF11Q86T75 865 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 KIFC2Q96AC6 838 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 MROH8Q9H579 483 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
IRF9-211ENST00000560852 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
IRF9-211ENST00000560852 FRMPD2Q68DX3 1309 aaPredicted RBP14.08□□□□□ -0.16
IRF9-211ENST00000560852 PNMA6FA0A0J9YX94 578 aa14.07□□□□□ -0.16
IRF9-211ENST00000560852 ZBTB5O15062 677 aa14.07□□□□□ -0.16
IRF9-211ENST00000560852 RAD21O60216 631 aa14.07□□□□□ -0.16
IRF9-211ENST00000560852 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
IRF9-211ENST00000560852 FKTNO75072 461 aa14.07□□□□□ -0.16
IRF9-211ENST00000560852 HSPA1AP0DMV8 641 aaKnown RBP14.07□□□□□ -0.16
IRF9-211ENST00000560852 HSPA1BP0DMV9 641 aaKnown RBP14.07□□□□□ -0.16
IRF9-211ENST00000560852 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
IRF9-211ENST00000560852 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms