RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 A0A1W2PQD8 194 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 ABCB4P21439 1286 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 CPXCR1Q8N123 301 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZNF277Q9NRM2 450 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 TBX22Q9Y458 520 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 ATP10BO94823 1461 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 PPFIA2O75334 1257 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 FANCBQ8NB91 859 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 SSH3Q8TE77 659 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 STAG1Q8WVM7 1258 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 TACO1Q9BSH4 297 aaKnown RBP14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 PCDHA12Q9UN75 941 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 COL4A3BPQ9Y5P4 624 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 UHRF1BP1Q6BDS2 1440 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 THAP12O43422 761 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 C1orf112Q9NSG2 853 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 RIPOR2Q9Y4F9 1068 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 NR1I2O75469 434 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 LMNB2Q03252 620 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 RNASELQ05823 741 aaKnown RBP14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 PPP2R5CQ13362 524 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 GNPTABQ3T906 1256 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 MIER3Q7Z3K6 550 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 CDC23Q9UJX2 597 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 PASKQ96RG2 1323 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 PFDN6O15212 129 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 OR52Z1P0C646 297 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 HSP90AA5PQ58FG0 334 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 SUN1O94901 812 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 DPP8Q6V1X1 898 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 ST7Q9NRC1 585 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 EDC4Q6P2E9 1401 aaKnown RBP14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 M0QZ92 97 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 PCP11498 1178 aaKnown RBP14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 KRT3P12035 628 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 KRT81Q14533 505 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 MAPKAPK5Q8IW41 473 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 RDH13Q8NBN7 331 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 CFAP61Q8NHU2 1237 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 FANCLQ9NW38 375 aa14.48□□□□□ -0.09
CSPG4P11-201ENST00000560634 GOLGA8QA0A0J9YX86 632 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 GOLGA8OA6NCC3 632 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 GOLGA8NF8WBI6 632 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 GCKP35557 465 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 TRIM50Q86XT4 487 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 DDX27Q96GQ7 796 aaKnown RBP14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 MYCBPQ99417 103 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 TAF5LO75529 589 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 LONP1P36776 959 aaKnown RBP14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 BPIFB4P59827 614 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 USH1GQ495M9 461 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 BSPRYQ5W0U4 402 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZBTB8OSQ8IWT0 167 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 CUEDC2Q9H467 287 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 BAG5Q9UL15 447 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 MAPKBP1O60336 1514 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZMYM6O95789 1325 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 CYP2J2P51589 502 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 GSDMAQ96QA5 445 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZSCAN10Q96SZ4 725 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 TTLL3Q9Y4R7 772 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 ATF2P15336 505 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 ATP1A2P50993 1020 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 PDE6CP51160 858 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 LRMPQ12912 555 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 CDKL2Q92772 493 aa14.47□□□□□ -0.09
CSPG4P11-201ENST00000560634 RNF8O76064 485 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 YARSP54577 528 aaKnown RBP14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 FAM178BQ8IXR5 827 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 LRRC8CQ8TDW0 803 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 USP17L12C9JPN9 530 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 USP17L21D6R901 530 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 UBAP1LF5GYI3 381 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 A1BGP04217 495 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 TGFBRAP1Q8WUH2 860 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 HESX1Q9UBX0 185 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 OPHN1O60890 802 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 BFSP1Q12934 665 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 RETREG2Q8NC44 543 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
CSPG4P11-201ENST00000560634 SCG2P13521 617 aa14.46□□□□□ -0.1
CSPG4P11-201ENST00000560634 GARSP41250 739 aaKnown RBP14.46□□□□□ -0.1
CSPG4P11-201ENST00000560634 GRM1Q13255 1194 aa14.46□□□□□ -0.1
CSPG4P11-201ENST00000560634 PSTPIP2Q9H939 334 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms