RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	FDX1	P10109	184 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	PRMT2	P55345	433 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	CAP1	Q01518	475 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	KIF22	Q14807	665 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	SEC23A	Q15436	765 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	RNF20	Q5VTR2	975 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	SLFN13	Q68D06	897 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	STOX1	Q6ZVD7	989 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	CD99L2	Q8TCZ2	262 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	RNF166	Q96A37	237 aa	Predicted RBP	9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	TMEM47	Q9BQJ4	181 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	FEM1B	Q9UK73	627 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	PPP1R9A	Q9ULJ8	1098 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	TAF6L	Q9Y6J9	622 aa		9.46	□□□□□ -0.9
RNF31-222	ENST00000560631	ZSWIM8	A7E2V4	1837 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	PLXNB2	O15031	1838 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	EIF5B	O60841	1220 aa	Known RBP	9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	CNMD	O75829	334 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	BMP3	P12645	472 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	HOXD10	P28358	340 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ERVK-9	P63128	1117 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ERVK-24	P63145	666 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631		Q3C1V9	767 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	FAM83B	Q5T0W9	1011 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	BTNL9	Q6UXG8	535 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	CYB5R4	Q7L1T6	521 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	OTOP1	Q7RTM1	612 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	FAM160B2	Q86V87	743 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	MB21D2	Q8IYB1	491 aa	Predicted RBP	9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	SPICE1	Q8N0Z3	855 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ANKRD13C	Q8N6S4	541 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ENAH	Q8N8S7	591 aa	Predicted RBP	9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	PRPF38A	Q8NAV1	312 aa	Known RBP	9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	GPRC5A	Q8NFJ5	357 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	CHURC1	Q8WUH1	139 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	DCAF4	Q8WV16	495 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	USP26	Q9BXU7	913 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	EFCC1	Q9HA90	598 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	TXNRD2	Q9NNW7	524 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	STX8	Q9UNK0	236 aa		9.45	□□□□□ -0.9
RNF31-222	ENST00000560631	ATP2A1	O14983	1001 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	FLOT1	O75955	427 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	CTGF	P29279	349 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	HSPA4	P34932	840 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	PSMC4	P43686	418 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	FCGRT	P55899	365 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	KRT32	Q14532	448 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	FBXO46	Q6PJ61	603 aa	Predicted RBP	9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	RALYL	Q86SE5	291 aa	Known RBP	9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	LRRC47	Q8N1G4	583 aa	Known RBP	9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	REPS2	Q8NFH8	660 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	IGDCC4	Q8TDY8	1250 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	TRIM47	Q96LD4	638 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	UBAC1	Q9BSL1	405 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	TANGO6	Q9C0B7	1094 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	FBXO28	Q9NVF7	368 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	BTBD7	Q9P203	1132 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	WDR19	Q8NEZ3	1342 aa		9.44	□□□□□ -0.9
RNF31-222	ENST00000560631	TNKS	O95271	1327 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	VWA5A	O00534	786 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	PDHB	P11177	359 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ZKSCAN1	P17029	563 aa	Predicted RBP	9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	MCC	P23508	829 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	MAPK4	P31152	587 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	MCM5	P33992	734 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SLC1A4	P43007	532 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ANTXR2	P58335	489 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	CCNA1	P78396	465 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ZNF543	Q08ER8	600 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SART3	Q15020	963 aa	Known RBP	9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	GPATCH4	Q5T3I0	446 aa	Known RBP	9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	TMTC2	Q8N394	836 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	PNMA1	Q8ND90	353 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SHCBP1	Q8NEM2	672 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ATG4C	Q96DT6	458 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	TMEM87B	Q96K49	555 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	NUP88	Q99567	741 aa	Predicted RBP	9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SLF1	Q9BQI6	1058 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ZKSCAN3	Q9BRR0	538 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ARHGAP39	Q9C0H5	1083 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	MCOLN1	Q9GZU1	580 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SPATC1L	Q9H0A9	340 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	SRRD	Q9UH36	339 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	TRIM17	Q9Y577	477 aa		9.43	□□□□□ -0.9
RNF31-222	ENST00000560631	ERICH2	A1L162	156 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	IFIT3	O14879	490 aa	Known RBP	9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	SLC25A27	O95847	323 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	HMGB1	P09429	215 aa	Known RBP	9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	COPB2	P35606	906 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	LIFR	P42702	1097 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	STAT2	P52630	851 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	OAZ1	P54368	228 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	EXOSC10	Q01780	885 aa	Known RBP	9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	IRF5	Q13568	498 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	TMEM132B	Q14DG7	1078 aa		9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	IFIT1B	Q5T764	474 aa	Known RBP	9.42	□□□□□ -0.9
RNF31-222	ENST00000560631	FBXL16	Q8N461	479 aa		9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms