RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CNPY2Q9Y2B0 182 aa10.88□□□□□ -0.67
RABGGTA-217ENST00000560521 TMX2Q9Y320 296 aa10.88□□□□□ -0.67
RABGGTA-217ENST00000560521 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 DUSP11O75319 330 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 CD4P01730 458 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 FGBP02675 491 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 MYOGP15173 224 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 STAT3P40763 770 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 RABGGTBP53611 331 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 POLA2Q14181 598 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 MAMDC4Q6UXC1 1216 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 ARHGAP45Q92619 1136 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 TNNQ9UQP3 1299 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 HCN4Q9Y3Q4 1203 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
RABGGTA-217ENST00000560521 UMODL1Q5DID0 1318 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 LCTP09848 1927 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 APBB1O00213 710 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 VWA5AO00534 786 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 ERC2O15083 957 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 CTAGE5O15320 804 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 CT47B1P0C2W7 299 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 C6orf222P0C671 652 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 CYP2D6P10635 497 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 AKR1B1P15121 316 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 OTOP2Q7RTS6 562 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 MSL3Q8N5Y2 521 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 PCSK9Q8NBP7 692 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 ZNF214Q9UL59 606 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-217ENST00000560521 MAGEB6P1A0A0J9YX57 407 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 RFXAPO00287 272 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 TLL1O43897 1013 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 GJA9P57773 515 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 ICA1Q05084 483 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 AAK1Q2M2I8 961 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 TMEM31Q5JXX7 168 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 SSH3Q8TE77 659 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 SDR42E1Q8WUS8 393 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 VWCEQ96DN2 955 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 UPF3AQ9H1J1 476 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 DCP1AQ9NPI6 582 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 RIPK3Q9Y572 518 aa10.85□□□□□ -0.67
RABGGTA-217ENST00000560521 DNAJC25-GNG10A0A024R161 153 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 SMIM22K7EJ46 135 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 GPR37L1O60883 481 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 SURF6O75683 361 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 ATP8B2P98198 1209 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 ACVR2BQ13705 512 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 TMED8Q6PL24 325 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 MTIF3Q9H2K0 278 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
RABGGTA-217ENST00000560521 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 BCAR3O75815 825 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 EEF2P13639 858 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 TRIM27P14373 513 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 COPB2P35606 906 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 CCL23P55773 120 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 BEX3Q00994 111 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 KRT40Q6A162 431 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 ALYREFQ86V81 257 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 DDX11Q96FC9 970 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 FGD4Q96M96 766 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 CRNKL1Q9BZJ0 848 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 WNT8AQ9H1J5 351 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 ABHD16BQ9H3Z7 469 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 SH2D4AQ9H788 454 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 PCDHA11Q9Y5I1 949 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 SLC4A7Q9Y6M7 1214 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 SIP14410 1827 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
RABGGTA-217ENST00000560521 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms