RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 GJB4Q9NTQ9 266 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 H3BQV1 296 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 F13A1P00488 732 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PTPRAP18433 802 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 SLC1A4P43007 532 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 FOSBP53539 338 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PFKFB3Q16875 520 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 CCDC96Q2M329 555 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 IFFO2Q5TF58 517 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 MAP1SQ66K74 1059 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 CLEC17AQ6ZS10 378 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 KCTD1Q719H9 257 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 KIAA1683Q9H0B3 1180 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 CPVLQ9H3G5 476 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 SH2D4AQ9H788 454 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 VCPKMTQ9H867 229 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 NMRK2Q9NPI5 230 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 PAPPA2Q9BXP8 1791 aa8.38□□□□□ -1.07
HMBOX1-214ENST00000560357 RAD21O60216 631 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 BMP3P12645 472 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 SCG2P13521 617 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 NF2P35240 595 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 SLC16A2P36021 539 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 RESTQ13127 1097 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 MAP3K11Q16584 847 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 KRT40Q6A162 431 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 FERMT3Q86UX7 667 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 ADGRF4Q8IZF3 695 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 PIBF1Q8WXW3 757 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 MTMR8Q96EF0 704 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 NUP88Q99567 741 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 ZHX2Q9Y6X8 837 aa8.37□□□□□ -1.07
HMBOX1-214ENST00000560357 OTOFQ9HC10 1997 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 TRAF5O00463 557 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 FMR1Q06787 632 aaKnown RBP eCLIP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 SPP2Q13103 211 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 TRIM29Q14134 588 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 VGLL4Q14135 290 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 ZYXQ15942 572 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 BTNL9Q6UXG8 535 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 MOB2Q70IA6 237 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 SPICE1Q8N0Z3 855 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 ZNF280CQ8ND82 737 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 RRP36Q96EU6 259 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 CHAMP1Q96JM3 812 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 PIGSQ96S52 555 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 FEZ1Q99689 392 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 PHF20Q9BVI0 1012 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 ZSCAN16Q9H4T2 348 aaPredicted RBP8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 JMJD4Q9H9V9 463 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 AS3MTQ9HBK9 375 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 SH3GLB2Q9NR46 395 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 EMILIN3Q9NT22 766 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 VPS54Q9P1Q0 977 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 KCNJ14Q9UNX9 436 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 AFG3L2Q9Y4W6 797 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 SNCAIPQ9Y6H5 919 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 TCHHQ07283 1943 aa8.36□□□□□ -1.07
HMBOX1-214ENST00000560357 PNMA6FA0A0J9YX94 578 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 C19orf81C9J6K1 198 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 TMEM232C9JQI7 657 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 SNPHO15079 494 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 PLA2G6O60733 806 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 MMP1P03956 469 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 XBP1P17861 261 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 U2AF2P26368 475 aaKnown RBP eCLIP8.35□□□□□ -1.072e-7■■■□□ 15.9
HMBOX1-214ENST00000560357 MCM4P33991 863 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 BACE1P56817 501 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 KIF23Q02241 960 aaPredicted RBP8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 MTMR2Q13614 643 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 NFKBIBQ15653 356 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 NPY5RQ15761 445 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 FAM83BQ5T0W9 1011 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 LDLRAD1Q5T700 205 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 SYDE2Q5VT97 1194 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 WWC2Q6AWC2 1192 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 MCTP1Q6DN14 999 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 FAM173BQ6P4H8 233 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 ARMC9Q7Z3E5 817 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 ANKRD13AQ8IZ07 590 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms