RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 FCGRTP55899 365 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 ERVK-9P63128 1117 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 ERVK-24P63145 666 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 LACTBP83111 547 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 TROAPQ12815 778 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 PKN2Q16513 984 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 C22orf23Q9BZE7 217 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 MROH8Q9H579 483 aa14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-215ENST00000560207 VWA5AO00534 786 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 STRNO43815 780 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 EVCP57679 992 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 DGKZQ13574 1117 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 GRM4Q14833 912 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 TKFCQ3LXA3 575 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 ANKRD13CQ8N6S4 541 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 ZNF296Q8WUU4 475 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 COA7Q96BR5 231 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 BACH2Q9BYV9 841 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 CPA4Q9UI42 421 aa14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-215ENST00000560207 PALM3A6NDB9 673 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 LBX1P52954 281 aa14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 KCTD1Q719H9 257 aa14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 CWC22Q9HCG8 908 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-215ENST00000560207 PCNTO95613 3336 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 KLRF2D3W0D1 207 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 ZBTB43O43298 467 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 SEC24BO95487 1268 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 STAT3P40763 770 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 Q6ZUG5 572 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 TEX2Q8IWB9 1127 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 ABRAQ8N0Z2 381 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 FANCBQ8NB91 859 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 ZNF274Q96GC6 653 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 SLC5A4Q9NY91 659 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 PRR12Q9ULL5 1215 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 IVNS1ABPQ9Y6Y0 642 aa14.03□□□□□ -0.16
RABGGTA-215ENST00000560207 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.16
RABGGTA-215ENST00000560207 PLXNB2O15031 1838 aa14.02□□□□□ -0.16
RABGGTA-215ENST00000560207 ZNF236Q9UL36 1845 aa14.02□□□□□ -0.16
RABGGTA-215ENST00000560207 DHX16O60231 1041 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 CTU1Q7Z7A3 348 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 TRMT44Q8IYL2 757 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 CHST13Q8NET6 341 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 EFCC1Q9HA90 598 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 FBXO28Q9NVF7 368 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 MAD2L2Q9UI95 211 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 MTMR7Q9Y216 660 aa14.02□□□□□ -0.17
RABGGTA-215ENST00000560207 NID2Q14112 1375 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 TNPO2O14787 897 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 ICAM1P05362 532 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 PSMC4P43686 418 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 RABEP1Q15276 862 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 SAMD3Q8N6K7 520 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 BRF1Q92994 677 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 R3HDMLQ9H3Y0 253 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 RIOX1Q9H6W3 641 aa14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 ZNF214Q9UL59 606 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-215ENST00000560207 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
RABGGTA-215ENST00000560207 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 ST18O60284 1047 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 NEK4P51957 841 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 PLS1Q14651 629 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 TMEM132BQ14DG7 1078 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 REPS2Q8NFH8 660 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
RABGGTA-215ENST00000560207 TXNRD2Q9NNW7 524 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 BTBD7Q9P203 1132 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 TSKSQ9UJT2 592 aa14□□□□□ -0.17
RABGGTA-215ENST00000560207 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms