RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HMX1Q9NP08 348 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-213ENST00000560175 FLRT1Q9NZU1 646 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 RAD21O60216 631 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 COBLO75128 1261 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 MCCP23508 829 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 ADORA2AP29274 412 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 STAT2P52630 851 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 PTH1RQ03431 593 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 RRP12Q5JTH9 1297 aaKnown RBP15.59■□□□□ 0.09
SMAD3-213ENST00000560175 OLFML2BQ68BL8 750 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 BTNL9Q6UXG8 535 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 FAM160B2Q86V87 743 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 DGKHQ86XP1 1220 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 MAP4K1Q92918 833 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 TEX13BQ9BXU2 312 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMAD3-213ENST00000560175 NEDD4P46934 1319 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 PLXNA1Q9UIW2 1896 aa15.59■□□□□ 0.09
SMAD3-213ENST00000560175 TMEM232C9JQI7 657 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 FCER1AP12319 257 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-213ENST00000560175 SLC1A4P43007 532 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 PLS1Q14651 629 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 CCDC178Q5BJE1 867 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 NCAPG2Q86XI2 1143 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 DCAF4Q8WV16 495 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 TOMM22Q9NS69 142 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 DIS3Q9Y2L1 958 aaKnown RBP15.58■□□□□ 0.08
SMAD3-213ENST00000560175 RIPK3Q9Y572 518 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 SMCHD1A6NHR9 2005 aa15.58■□□□□ 0.08
SMAD3-213ENST00000560175 DNAJC25-GNG10A0A024R161 153 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 ZBED4O75132 1171 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
SMAD3-213ENST00000560175 WDR78Q5VTH9 848 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 DPP9Q86TI2 863 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 KIFC2Q96AC6 838 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 DEFB118Q96PH6 123 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 CWC22Q9HCG8 908 aaKnown RBP15.57■□□□□ 0.08
SMAD3-213ENST00000560175 ZNF536O15090 1300 aa15.57■□□□□ 0.08
SMAD3-213ENST00000560175 KDM4AO75164 1064 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 CYP21A2P08686 494 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 PDHBP11177 359 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-213ENST00000560175 ZNF792Q3KQV3 632 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 LHX8Q68G74 356 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 KCTD1Q719H9 257 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 ANKLE1Q8NAG6 615 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 KRT23Q9C075 422 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 CNNM2Q9H8M5 875 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 SLC5A4Q9NY91 659 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 OGDHLQ9ULD0 1010 aa15.56■□□□□ 0.08
SMAD3-213ENST00000560175 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-213ENST00000560175 B4E1Z4 1266 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 MFSD14CQ5VZR4 134 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
SMAD3-213ENST00000560175 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SMAD3-213ENST00000560175 RASGRP2Q7LDG7 609 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 SKAP1Q86WV1 359 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 IQCA1Q86XH1 822 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 CHST13Q8NET6 341 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 MAML3Q96JK9 1138 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 MMP19Q99542 508 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 RAVER2Q9HCJ3 691 aaKnown RBP15.55■□□□□ 0.08
SMAD3-213ENST00000560175 PRR12Q9ULL5 1215 aa15.55■□□□□ 0.08
SMAD3-213ENST00000560175 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 CCND3P30281 292 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-213ENST00000560175 KCTD2Q14681 263 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 CPXCR1Q8N123 301 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 ENAHQ8N8S7 591 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-213ENST00000560175 TRPV1Q8NER1 839 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 CCDC136Q96JN2 1154 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 ZSCAN10Q96SZ4 725 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-213ENST00000560175 ESYT1Q9BSJ8 1104 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 LSG1Q9H089 658 aaKnown RBP15.54■□□□□ 0.08
SMAD3-213ENST00000560175 RANBP17Q9H2T7 1088 aaKnown RBP15.54■□□□□ 0.08
SMAD3-213ENST00000560175 FBXO40Q9UH90 709 aa15.54■□□□□ 0.08
SMAD3-213ENST00000560175 TFRCP02786 760 aaKnown RBP15.53■□□□□ 0.08
SMAD3-213ENST00000560175 CYBAP13498 195 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 CYP2C19P33261 490 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 ZNF543Q08ER8 600 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 SEC23AQ15436 765 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 TKFCQ3LXA3 575 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 ERICH6BQ5W0A0 696 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 MSL3Q8N5Y2 521 aaKnown RBP15.53■□□□□ 0.08
SMAD3-213ENST00000560175 ZKSCAN3Q9BRR0 538 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 NRBP1Q9UHY1 535 aa15.53■□□□□ 0.08
SMAD3-213ENST00000560175 GPATCH4Q5T3I0 446 aaKnown RBP15.52■□□□□ 0.08
SMAD3-213ENST00000560175 CYB5R4Q7L1T6 521 aa15.52■□□□□ 0.08
SMAD3-213ENST00000560175 ZNF467Q7Z7K2 595 aaPredicted RBP15.52■□□□□ 0.08
SMAD3-213ENST00000560175 PNMA1Q8ND90 353 aa15.52■□□□□ 0.08
SMAD3-213ENST00000560175 AGBL1Q96MI9 1066 aa15.52■□□□□ 0.08
SMAD3-213ENST00000560175 TINF2Q9BSI4 451 aa15.52■□□□□ 0.08
SMAD3-213ENST00000560175 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.08
SMAD3-213ENST00000560175 TNKSO95271 1327 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 E7EWF7 191 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms