RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
TM2D3-208ENST00000559891 SMCHD1A6NHR9 2005 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 CNTNAP5Q8WYK1 1306 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 CALM1P0DP23 149 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 CALM2P0DP24 149 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 CALM3P0DP25 149 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 GJB2P29033 226 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 FSTL1Q12841 308 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 PPIL2Q13356 520 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 PKP1Q13835 747 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 SPRYD7Q5W111 196 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
TM2D3-208ENST00000559891 PKN1Q16512 942 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 CYP4F22Q6NT55 531 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
TM2D3-208ENST00000559891 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 PIGSQ96S52 555 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 FAM155AB1AL88 458 aaPredicted RBP13.42□□□□□ -0.26
TM2D3-208ENST00000559891 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 IFNAR1P17181 557 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 IKQ13123 557 aaPredicted RBP13.42□□□□□ -0.26
TM2D3-208ENST00000559891 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
TM2D3-208ENST00000559891 KIFC2Q96AC6 838 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 SH2D4AQ9H788 454 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
TM2D3-208ENST00000559891 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
TM2D3-208ENST00000559891 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
TM2D3-208ENST00000559891 KIF5BP33176 963 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 RCAN1P53805 252 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 ASPRV1Q53RT3 343 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 PPP4R3BQ5MIZ7 849 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
TM2D3-208ENST00000559891 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 PTPN18Q99952 460 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
TM2D3-208ENST00000559891 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
TM2D3-208ENST00000559891 RLFQ13129 1914 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
TM2D3-208ENST00000559891 C12orf42Q96LP6 360 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 ORC3Q9UBD5 711 aaPredicted RBP13.4□□□□□ -0.26
TM2D3-208ENST00000559891 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 CXCL11O14625 94 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 FLOT1O75955 427 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.26
TM2D3-208ENST00000559891 USP14P54578 494 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
TM2D3-208ENST00000559891 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 LPAR1Q92633 364 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 TMOD4Q9NZQ9 345 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
TM2D3-208ENST00000559891 CCL15-CCL14A0A0B4J2E2 113 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 APLP1P51693 650 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 STAT2P52630 851 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 CCL15Q16663 113 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 ZSCAN23Q3MJ62 389 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 PARP14Q460N5 1801 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 MYH6P13533 1939 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 BTBD19C9JJ37 291 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 AOC2O75106 756 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 SLC10A3P09131 477 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 CYP2C8P10632 490 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 R3HDMLQ9H3Y0 253 aa13.39□□□□□ -0.27
TM2D3-208ENST00000559891 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
TM2D3-208ENST00000559891 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
TM2D3-208ENST00000559891 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms