RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RCSD1Q6JBY9 416 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 WRNIP1Q96S55 665 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 USP25Q9UHP3 1055 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 CNTNAP5Q8WYK1 1306 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 A0A1B0GVL5 298 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 PHF20L1A8MW92 1017 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 RASA1P20936 1047 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 NDUFA8P51970 172 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 FSTL1Q12841 308 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 CERKLQ49MI3 558 aaPredicted RBP20.41■□□□□ 0.86
SNX1-208ENST00000559844 MOB2Q70IA6 237 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 ZSCAN30Q86W11 494 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 KLRG1Q96E93 195 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
SNX1-208ENST00000559844 V9GY48 417 aaPredicted RBP20.41■□□□□ 0.86
SNX1-208ENST00000559844 MYH6P13533 1939 aa20.4■□□□□ 0.86
SNX1-208ENST00000559844 CUTAO60888 179 aa20.4■□□□□ 0.86
SNX1-208ENST00000559844 GDF11O95390 407 aa20.4■□□□□ 0.86
SNX1-208ENST00000559844 RRP1BQ14684 758 aaKnown RBP20.4■□□□□ 0.86
SNX1-208ENST00000559844 PHF20Q9BVI0 1012 aa20.4■□□□□ 0.86
SNX1-208ENST00000559844 INPP5BP32019 993 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 KRT2P35908 639 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 IREB2P48200 963 aaKnown RBP20.39■□□□□ 0.86
SNX1-208ENST00000559844 GNAQP50148 359 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 STX1AQ16623 288 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 CST9Q5W186 159 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 ARMC9Q7Z3E5 817 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 GBA2Q9HCG7 927 aaPredicted RBP20.39■□□□□ 0.86
SNX1-208ENST00000559844 CEP131Q9UPN4 1083 aa20.39■□□□□ 0.86
SNX1-208ENST00000559844 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.85
SNX1-208ENST00000559844 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
SNX1-208ENST00000559844 AKR1B1P15121 316 aa20.39■□□□□ 0.85
SNX1-208ENST00000559844 MARCKSP29966 332 aaPredicted RBP20.39■□□□□ 0.85
SNX1-208ENST00000559844 SHROOM1Q2M3G4 852 aaPredicted RBP20.39■□□□□ 0.85
SNX1-208ENST00000559844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.39■□□□□ 0.858e-11■□□□□ 8.9
SNX1-208ENST00000559844 TIGD1Q96MW7 591 aa20.39■□□□□ 0.85
SNX1-208ENST00000559844 SDF4Q9BRK5 362 aa20.39■□□□□ 0.85
SNX1-208ENST00000559844 IL17RBQ9NRM6 502 aa20.39■□□□□ 0.85
SNX1-208ENST00000559844 ZNF112Q9UJU3 913 aa20.39■□□□□ 0.85
SNX1-208ENST00000559844 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
SNX1-208ENST00000559844 ADCY5O95622 1261 aa20.38■□□□□ 0.85
SNX1-208ENST00000559844 SRBD1Q8N5C6 995 aaKnown RBP20.38■□□□□ 0.85
SNX1-208ENST00000559844 PNMA1Q8ND90 353 aa20.38■□□□□ 0.85
SNX1-208ENST00000559844 ZKSCAN4Q969J2 545 aaPredicted RBP20.38■□□□□ 0.85
SNX1-208ENST00000559844 CBX8Q9HC52 389 aa20.38■□□□□ 0.85
SNX1-208ENST00000559844 PFKFB1P16118 471 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 CLCN1P35523 988 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 CAP2P40123 477 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 ABCB5Q2M3G0 1257 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 C2orf69Q8N8R5 385 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 ANO10Q9NW15 660 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 VPS54Q9P1Q0 977 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 CTNND1O60716 968 aaKnown RBP20.37■□□□□ 0.85
SNX1-208ENST00000559844 ZNF202O95125 648 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 PTMAP06454 111 aaKnown RBP20.37■□□□□ 0.85
SNX1-208ENST00000559844 ZNF165P49910 485 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 FKBP1BP68106 108 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 GRM4Q14833 912 aa20.37■□□□□ 0.85
SNX1-208ENST00000559844 KRI1Q8N9T8 703 aaKnown RBP20.37■□□□□ 0.85
SNX1-208ENST00000559844 MORC2Q9Y6X9 1032 aaPredicted RBP20.37■□□□□ 0.85
SNX1-208ENST00000559844 GH2P01242 217 aa20.36■□□□□ 0.85
SNX1-208ENST00000559844 MSNP26038 577 aaKnown RBP20.36■□□□□ 0.85
SNX1-208ENST00000559844 TOB1P50616 345 aaPredicted RBP20.36■□□□□ 0.85
SNX1-208ENST00000559844 JAG1P78504 1218 aa20.36■□□□□ 0.85
SNX1-208ENST00000559844 MAP3K9P80192 1104 aa20.36■□□□□ 0.85
SNX1-208ENST00000559844 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
SNX1-208ENST00000559844 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
SNX1-208ENST00000559844 HPSEQ9Y251 543 aa20.36■□□□□ 0.85
SNX1-208ENST00000559844 SCG2P13521 617 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 NR5A1Q13285 461 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 PFKFB3Q16875 520 aaPredicted RBP20.35■□□□□ 0.85
SNX1-208ENST00000559844 RESP18Q5W5W9 173 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.35■□□□□ 0.85
SNX1-208ENST00000559844 NEDD1Q8NHV4 660 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 DNAJC25Q9H1X3 360 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 CABP5Q9NP86 173 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 ZBTB21Q9ULJ3 1066 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 CSADQ9Y600 493 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 MYH4Q9Y623 1939 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 SYKP43405 635 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 VGLL4Q14135 290 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 LUZP1Q86V48 1076 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 ANKRD13AQ8IZ07 590 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 SCYL3Q8IZE3 742 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 OXER1Q8TDS5 423 aa20.35■□□□□ 0.85
SNX1-208ENST00000559844 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.35■□□□□ 0.85
SNX1-208ENST00000559844 ASNSP08243 561 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 ZRSR1Q15695 479 aaKnown RBP20.34■□□□□ 0.85
SNX1-208ENST00000559844 SHC4Q6S5L8 630 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 TMEM179Q6ZVK1 233 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 LZTS2Q9BRK4 669 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 BMP15O95972 392 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 PLCB2Q00722 1185 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 SEPT2Q15019 361 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 CLMNQ96JQ2 1002 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 NAT10Q9H0A0 1025 aaKnown RBP20.34■□□□□ 0.85
SNX1-208ENST00000559844 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
SNX1-208ENST00000559844 PICK1Q9NRD5 415 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms