RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 RRP36Q96EU6 259 aaKnown RBP12.08□□□□□ -0.48
TPM1-221ENST00000559831 C12orf42Q96LP6 360 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 AIFM3Q96NN9 605 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 PIGSQ96S52 555 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
TPM1-221ENST00000559831 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 KCNH4Q9UQ05 1017 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 RLFQ13129 1914 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 A0A0G2JLL6 359 aaPredicted RBP12.07□□□□□ -0.48
TPM1-221ENST00000559831 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 FLOT1O75955 427 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 SMARCA1P28370 1054 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
TPM1-221ENST00000559831 SNAP25P60880 206 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 SNAPC2Q13487 334 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
TPM1-221ENST00000559831 PRRT2Q7Z6L0 340 aaPredicted RBP12.07□□□□□ -0.48
TPM1-221ENST00000559831 SAPCD2Q86UD0 394 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 RASAL3Q86YV0 1011 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 WASF1Q92558 559 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
TPM1-221ENST00000559831 PRR12Q9ULL5 1215 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
TPM1-221ENST00000559831 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L15C9J2P7 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L13C9JLJ4 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L11C9JVI0 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L18D6R9N7 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L22D6RA61 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L17D6RBQ6 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L19D6RCP7 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L20D6RJB6 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 H3BQV1 296 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 SCG2P13521 617 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 PDCP20941 246 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 GUCY1B3Q02153 619 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 USP17L24Q0WX57 530 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 TRIM29Q14134 588 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 PKN1Q16512 942 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 FOXD4L5Q5VV16 416 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 FOXD4L4Q8WXT5 416 aaPredicted RBP12.06□□□□□ -0.48
TPM1-221ENST00000559831 GPKOWQ92917 476 aaPredicted RBP eCLIP12.06□□□□□ -0.48
TPM1-221ENST00000559831 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
TPM1-221ENST00000559831 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 STX6O43752 255 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 PLA2G6O60733 806 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
TPM1-221ENST00000559831 SYT1P21579 422 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 DDIT3P35638 169 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 GTF2A2P52657 109 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 CCL15Q16663 113 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 OTUD7BQ6GQQ9 843 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 CCDC174Q6PII3 467 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
TPM1-221ENST00000559831 GJB4Q9NTQ9 266 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
TPM1-221ENST00000559831 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
TPM1-221ENST00000559831 ZBTB5O15062 677 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 CETPP11597 493 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 XBP1P17861 261 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
TPM1-221ENST00000559831 GRM1Q13255 1194 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 PKP1Q13835 747 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
TPM1-221ENST00000559831 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
TPM1-221ENST00000559831 AGTPBP1Q9UPW5 1226 aa12.04□□□□□ -0.48
TPM1-221ENST00000559831 ZBED4O75132 1171 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 SLC10A3P09131 477 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
TPM1-221ENST00000559831 DSG3P32926 999 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 APLP1P51693 650 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 NAPAP54920 295 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 NUCB2P80303 420 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM1-221ENST00000559831 MOGSQ13724 837 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms