RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 JMJD4Q9H9V9 463 aa14.54□□□□□ -0.08
USP3-213ENST00000559711 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
USP3-213ENST00000559711 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
USP3-213ENST00000559711 FBXO2Q9UK22 296 aaPredicted RBP14.54□□□□□ -0.08
USP3-213ENST00000559711 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
USP3-213ENST00000559711 ESYT2A0FGR8 921 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 PFKFB1P16118 471 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 TNNI2P48788 182 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 SLFN13Q68D06 897 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 PIK3AP1Q6ZUJ8 805 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 ADGRF4Q8IZF3 695 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 CLIC6Q96NY7 704 aa14.53□□□□□ -0.08
USP3-213ENST00000559711 CNOT7Q9UIV1 285 aaKnown RBP14.53□□□□□ -0.08
USP3-213ENST00000559711 BAZ2BQ9UIF8 2168 aaKnown RBP14.52□□□□□ -0.08
USP3-213ENST00000559711 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 F5H6K3 240 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 EGFRP00533 1210 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 ATP2B1P20020 1258 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 GNA11P29992 359 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 NAPAP54920 295 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 KLRC3Q07444 240 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 TNFAIP1Q13829 316 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 CCDC96Q2M329 555 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 TTC38Q5R3I4 469 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 MICALL2Q8IY33 904 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 CKAP2LQ8IYA6 745 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 GMCL1Q96IK5 515 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 TIGD1Q96MW7 591 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 PCDHA6Q9UN73 950 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 PCDHA8Q9Y5H6 950 aa14.52□□□□□ -0.08
USP3-213ENST00000559711 SMCO2A6NFE2 343 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 WNT7AO00755 349 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 ZNF202O95125 648 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 SLC1A4P43007 532 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 RASA3Q14644 834 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 CDAN1Q8IWY9 1227 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 GJA3Q9Y6H8 435 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 MYH6P13533 1939 aa14.52□□□□□ -0.09
USP3-213ENST00000559711 ZNF541Q9H0D2 1346 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 LMNB1P20700 586 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 TYRO3Q06418 890 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 UVSSAQ2YD98 709 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 TEPSINQ96N21 525 aa14.51□□□□□ -0.09
USP3-213ENST00000559711 FHDC1Q9C0D6 1143 aaPredicted RBP14.51□□□□□ -0.09
USP3-213ENST00000559711 CCDC194A0A1B0GVG4 234 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 A0A1W2PRG0 241 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 ZBTB5O15062 677 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 NDUFB10O96000 172 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 SLC16A2P36021 539 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 CAP2P40123 477 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 SYKP43405 635 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 ATP2C1P98194 919 aaPredicted RBP14.5□□□□□ -0.09
USP3-213ENST00000559711 ZNF174Q15697 407 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 ARHGAP27Q6ZUM4 889 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 RNF214Q8ND24 703 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 RASGRP4Q8TDF6 673 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 SDF4Q9BRK5 362 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 MRVI1Q9Y6F6 885 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 ARFGEF1Q9Y6D6 1849 aa14.5□□□□□ -0.09
USP3-213ENST00000559711 MYH8P13535 1937 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 USP17L10C9JJH3 530 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 GRIN1Q05586 938 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 PTGDRQ13258 359 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 SASS6Q6UVJ0 657 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 BTNL9Q6UXG8 535 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 ARHGEF10LQ9HCE6 1279 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 TMX2Q9Y320 296 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 H7C1D1 291 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 PPP1R11O60927 126 aaPredicted RBP14.49□□□□□ -0.09
USP3-213ENST00000559711 KIF4BQ2VIQ3 1234 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 TBC1D10BQ4KMP7 808 aaPredicted RBP14.49□□□□□ -0.09
USP3-213ENST00000559711 ELOA2Q8IYF1 753 aaPredicted RBP14.49□□□□□ -0.09
USP3-213ENST00000559711 C4orf32Q8N8J7 132 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 COA7Q96BR5 231 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 FAM13BQ9NYF5 915 aa14.49□□□□□ -0.09
USP3-213ENST00000559711 CAVIN2O95810 425 aa14.48□□□□□ -0.09
USP3-213ENST00000559711 BMP3P12645 472 aa14.48□□□□□ -0.09
USP3-213ENST00000559711 ARL6IP4Q66PJ3 421 aaKnown RBP14.48□□□□□ -0.09
USP3-213ENST00000559711 GPC2Q8N158 579 aa14.48□□□□□ -0.09
USP3-213ENST00000559711 CSRNP2Q9H175 543 aa14.48□□□□□ -0.09
USP3-213ENST00000559711 HACL1Q9UJ83 578 aa14.48□□□□□ -0.09
USP3-213ENST00000559711 RAD21O60216 631 aa14.47□□□□□ -0.09
USP3-213ENST00000559711 ASNSP08243 561 aa14.47□□□□□ -0.09
USP3-213ENST00000559711 ADCY7P51828 1080 aa14.47□□□□□ -0.09
USP3-213ENST00000559711 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP3-213ENST00000559711 INF2Q27J81 1249 aa14.47□□□□□ -0.09
USP3-213ENST00000559711 REXO1Q8N1G1 1221 aaKnown RBP14.47□□□□□ -0.09
USP3-213ENST00000559711 FAM200AQ8TCP9 573 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms