RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SULF1Q8IWU6 871 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■□□□□ 11.1
RABGGTA-209ENST00000559551 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 LEO1Q8WVC0 666 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 BMP3P12645 472 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 M0R2N6 131 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 PTPRAP18433 802 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 SNAP25P60880 206 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 SUPT20HL1Q3ZLR7 823 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 EAPPQ56P03 285 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 NOSTRINQ8IVI9 506 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 CDCA5Q96FF9 252 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
RABGGTA-209ENST00000559551 TMEM232C9JQI7 657 aa16.46■□□□□ 0.22
RABGGTA-209ENST00000559551 COA7Q96BR5 231 aa16.46■□□□□ 0.22
RABGGTA-209ENST00000559551 HOOK2Q96ED9 719 aa16.46■□□□□ 0.22
RABGGTA-209ENST00000559551 GINM1Q9NU53 330 aa16.46■□□□□ 0.22
RABGGTA-209ENST00000559551 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 WNT7AO00755 349 aa16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 FMR1Q06787 632 aaKnown RBP eCLIP16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 RCOR1Q9UKL0 485 aa16.45■□□□□ 0.22
RABGGTA-209ENST00000559551 ELP1O95163 1332 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 TAL1P17542 331 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 XBP1P17861 261 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 KRT2P35908 639 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 NLRP5P59047 1200 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 QRICH1Q2TAL8 776 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 RASGRP4Q8TDF6 673 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 COL11A1P12107 1806 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 PNMA6FA0A0J9YX94 578 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 ZBTB5O15062 677 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 SAFBQ15424 915 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 SPATA32Q96LK8 384 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
RABGGTA-209ENST00000559551 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 SPP2Q13103 211 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 VGLL4Q14135 290 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 ZMYND12Q9H0C1 365 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
RABGGTA-209ENST00000559551 NAPAP54920 295 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 MTMR2Q13614 643 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 PTPAQ15257 358 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 CDC37Q16543 378 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 BLIDQ8IZY5 108 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 ZNF396Q96N95 335 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 POLR3EQ9NVU0 708 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 GNL2Q13823 731 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 KLHL40Q2TBA0 621 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 ANO1Q5XXA6 986 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 FEZ1Q99689 392 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 PCDHA6Q9UN73 950 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 PCDHA8Q9Y5H6 950 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 ZHX2Q9Y6X8 837 aa16.42■□□□□ 0.22
RABGGTA-209ENST00000559551 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 PCDHB6Q9Y5E3 794 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 TRAF5O00463 557 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 STAT2P52630 851 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 BACE1P56817 501 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms