RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 UNC5AQ6ZN44 842 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 PRRT2Q7Z6L0 340 aaPredicted RBP5.41□□□□□ -1.54
CASC4-210ENST00000559550 TAB3Q8N5C8 712 aaPredicted RBP5.41□□□□□ -1.54
CASC4-210ENST00000559550 PIWIL2Q8TC59 973 aaKnown RBP5.41□□□□□ -1.54
CASC4-210ENST00000559550 UBE2FQ969M7 185 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 CRBNQ96SW2 442 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.41□□□□□ -1.54
CASC4-210ENST00000559550 ZSWIM5Q9P217 1185 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 C9IYK1 514 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 CLEC3AO75596 197 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 ERVFC1P60507 584 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 TDRD10Q5VZ19 366 aaKnown RBP5.4□□□□□ -1.54
CASC4-210ENST00000559550 TTC6Q86TZ1 520 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 CPLX3Q8WVH0 158 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 ANAPC16Q96DE5 110 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 ALPK1Q96QP1 1244 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 MCOLN1Q9GZU1 580 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 XYLT2Q9H1B5 865 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
CASC4-210ENST00000559550 LTBP3Q9NS15 1303 aa5.4□□□□□ -1.55
CASC4-210ENST00000559550 FGRP09769 529 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 RNF4P78317 190 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 GNL2Q13823 731 aaKnown RBP5.39□□□□□ -1.55
CASC4-210ENST00000559550 GAB4Q2WGN9 574 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 NBPF9Q3BBW0 867 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 TMC3Q7Z5M5 1100 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 CCDC120Q96HB5 630 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 GPR62Q9BZJ7 368 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 SP110Q9HB58 689 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 FAM86C1Q9NVL1 165 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 SUCOQ9UBS9 1254 aaKnown RBP5.39□□□□□ -1.55
CASC4-210ENST00000559550 KCNH3Q9ULD8 1083 aa5.39□□□□□ -1.55
CASC4-210ENST00000559550 MYOCOSA0A1B0GUC4 107 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 A0A1W2PQH9 124 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 ESR1P03372 595 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 ADRB1P08588 477 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 DNAJA1P31689 397 aaKnown RBP5.38□□□□□ -1.55
CASC4-210ENST00000559550 CHMP4BP1P59074 171 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 ZC3H6P61129 1189 aaKnown RBP5.38□□□□□ -1.55
CASC4-210ENST00000559550 ARID5AQ03989 594 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 THAP5Q7Z6K1 395 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 VPS37DQ86XT2 251 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
CASC4-210ENST00000559550 PRDM14Q9GZV8 571 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 PCDHB10Q9UN67 800 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 MINPP1Q9UNW1 487 aa5.38□□□□□ -1.55
CASC4-210ENST00000559550 DNAJC25-GNG10A0A024R161 153 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 SHOXO15266 292 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 HPXP02790 462 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 TPP2P29144 1249 aaPredicted RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 ETFBP38117 255 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 PMS1P54277 932 aaKnown RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 DLG4P78352 724 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 NMIQ13287 307 aaPredicted RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 NAALADL2Q58DX5 795 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 TSPYL5Q86VY4 417 aaPredicted RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 C19orf47Q8N9M1 422 aaKnown RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 SLC43A3Q8NBI5 491 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 OR6P1Q8NGX9 317 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 DHRS1Q96LJ7 313 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 GMLQ99445 158 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 GCM1Q9NP62 436 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 GPATCH2Q9NW75 528 aa5.37□□□□□ -1.55
CASC4-210ENST00000559550 ZNF214Q9UL59 606 aaPredicted RBP5.37□□□□□ -1.55
CASC4-210ENST00000559550 TP53P04637 393 aaPredicted RBP5.36□□□□□ -1.55
CASC4-210ENST00000559550 SSBP05455 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
CASC4-210ENST00000559550 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
CASC4-210ENST00000559550 PPP2R5EQ16537 467 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 RALGPS1Q5JS13 557 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
CASC4-210ENST00000559550 DCAF15Q66K64 600 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 CREG2Q8IUH2 290 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 CCDC144CPQ8IYA2 1237 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 MYLIPQ8WY64 445 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 TRIT1Q9H3H1 467 aaKnown RBP5.36□□□□□ -1.55
CASC4-210ENST00000559550 ZNF408Q9H9D4 720 aa5.36□□□□□ -1.55
CASC4-210ENST00000559550 SMAD7O15105 426 aaKnown RBP5.35□□□□□ -1.55
CASC4-210ENST00000559550 RAC2P15153 192 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 CASP7P55210 303 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 CLEC16AQ2KHT3 1053 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 TCERG1LQ5VWI1 586 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 TMPRSS7Q7RTY8 843 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 NPM2Q86SE8 214 aaKnown RBP5.35□□□□□ -1.55
CASC4-210ENST00000559550 HDAC8Q9BY41 377 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 RNF32Q9H0A6 362 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 SLAMF8Q9P0V8 285 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 DUSP13Q9UII6 198 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 PCDHA11Q9Y5I1 949 aa5.35□□□□□ -1.55
CASC4-210ENST00000559550 OTOL1A6NHN0 477 aaPredicted RBP5.34□□□□□ -1.55
CASC4-210ENST00000559550 CBFA2T2O43439 604 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 SIGLEC6O43699 453 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 PEX10O60683 326 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 PRAMEF1O95521 474 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 CELA3BP08861 270 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 C7orf61Q8IZ16 206 aa5.34□□□□□ -1.55
CASC4-210ENST00000559550 SYTL5Q8TDW5 730 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms