RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 LRRC41Q15345 812 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 GPR153Q6NV75 609 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 ATP11BQ9Y2G3 1177 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
LRRC28-213ENST00000559399 MYH7P12883 1935 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 SLFN13Q68D06 897 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 SLC39A5Q6ZMH5 540 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 MSL3Q8N5Y2 521 aaKnown RBP17.75■□□□□ 0.43
LRRC28-213ENST00000559399 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 SLC38A10Q9HBR0 1119 aa17.75■□□□□ 0.43
LRRC28-213ENST00000559399 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 FOXP2O15409 715 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 ZNF865P0CJ78 1059 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 BMP3P12645 472 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 AKR1A1P14550 325 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 TAL1P17542 331 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 ADCYAP1R1P41586 468 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 OAZ1P54368 228 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 SNX17Q15036 470 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 RNF180Q86T96 592 aa17.74■□□□□ 0.43
LRRC28-213ENST00000559399 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
LRRC28-213ENST00000559399 SYNGAP1Q96PV0 1343 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 DNAJC25-GNG10A0A024R161 153 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 TRIM60Q495X7 471 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 FBXO40Q9UH90 709 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 PHF24Q9UPV7 400 aa17.73■□□□□ 0.43
LRRC28-213ENST00000559399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
LRRC28-213ENST00000559399 MYH8P13535 1937 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 TSPY2A6NKD2 308 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 PGK1P00558 417 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 FDX1P10109 184 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 STAT2P52630 851 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 PDE1AP54750 535 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 MAMDC4Q6UXC1 1216 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
LRRC28-213ENST00000559399 ZNF467Q7Z7K2 595 aaPredicted RBP17.72■□□□□ 0.43
LRRC28-213ENST00000559399 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 CHST13Q8NET6 341 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
LRRC28-213ENST00000559399 ZHX1Q9UKY1 873 aaPredicted RBP17.72■□□□□ 0.43
LRRC28-213ENST00000559399 STX8Q9UNK0 236 aa17.72■□□□□ 0.43
LRRC28-213ENST00000559399 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 SLC1A4P43007 532 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 FAM160B2Q86V87 743 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 DEFB123Q8N688 67 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 LENG1Q96BZ8 264 aaPredicted RBP17.71■□□□□ 0.43
LRRC28-213ENST00000559399 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
LRRC28-213ENST00000559399 FRMPD3Q5JV73 1810 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 SNAI1O95863 264 aaPredicted RBP17.7■□□□□ 0.42
LRRC28-213ENST00000559399 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
LRRC28-213ENST00000559399 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 PDLIM7Q9NR12 457 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 FAM184BQ9ULE4 1060 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 PARP14Q460N5 1801 aa17.7■□□□□ 0.42
LRRC28-213ENST00000559399 A0A1W2PQ45 241 aaPredicted RBP17.69■□□□□ 0.42
LRRC28-213ENST00000559399 A0A1W2PQY0 241 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 ADAMTS4O75173 837 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 MCCP23508 829 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 TICAM2Q86XR7 235 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 STAG1Q8WVM7 1258 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 ACAD9Q9H845 621 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.69■□□□□ 0.42
LRRC28-213ENST00000559399 SYNRGQ9UMZ2 1314 aa17.69■□□□□ 0.42
LRRC28-213ENST00000559399 ORC4O43929 436 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 RANBP6O60518 1105 aaKnown RBP17.68■□□□□ 0.42
LRRC28-213ENST00000559399 NMT2O60551 498 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 PLA2G6O60733 806 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 TLE2Q04725 743 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 AAMPQ13685 434 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 ALX1Q15699 326 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 Q7L0L9 218 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 FGD4Q96M96 766 aa17.68■□□□□ 0.42
LRRC28-213ENST00000559399 TSEN34Q9BSV6 310 aaKnown RBP17.68■□□□□ 0.42
LRRC28-213ENST00000559399 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
LRRC28-213ENST00000559399 ACVR2BQ13705 512 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 ARMCX2Q7L311 632 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms