RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
TPM1-218ENST00000559281 SEPT4O43236 478 aa21.03■□□□□ 0.96
TPM1-218ENST00000559281 FGAP02671 866 aa21.03■□□□□ 0.96
TPM1-218ENST00000559281 CPXCR1Q8N123 301 aa21.03■□□□□ 0.96
TPM1-218ENST00000559281 PFASO15067 1338 aa21.03■□□□□ 0.96
TPM1-218ENST00000559281 A0A0D9SFI3 127 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 DNM1LO00429 736 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 ORC4O43929 436 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 PGK2P07205 417 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 HSPD1P10809 573 aaKnown RBP21.02■□□□□ 0.96
TPM1-218ENST00000559281 SLC1A4P43007 532 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 SLC4A3P48751 1232 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 FXR1P51114 621 aaKnown RBP eCLIP21.02■□□□□ 0.96
TPM1-218ENST00000559281 OAZ1P54368 228 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
TPM1-218ENST00000559281 ZNF792Q3KQV3 632 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 FAM160B2Q86V87 743 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 PLEKHM2Q8IWE5 1019 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 GMCL1Q96IK5 515 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 TINF2Q9BSI4 451 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 SENP6Q9GZR1 1112 aaPredicted RBP21.02■□□□□ 0.96
TPM1-218ENST00000559281 SLC38A10Q9HBR0 1119 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 TOMM22Q9NS69 142 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 FBXO40Q9UH90 709 aa21.02■□□□□ 0.96
TPM1-218ENST00000559281 SUPT16HQ9Y5B9 1047 aaKnown RBP21.02■□□□□ 0.96
TPM1-218ENST00000559281 A0A1W2PPC1 479 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 TMEM232C9JQI7 657 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 STAT2P52630 851 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
TPM1-218ENST00000559281 PRAMEF19Q5SWL8 479 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 MSL3Q8N5Y2 521 aaKnown RBP21.01■□□□□ 0.95
TPM1-218ENST00000559281 STAG1Q8WVM7 1258 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 RAVER2Q9HCJ3 691 aaKnown RBP21.01■□□□□ 0.95
TPM1-218ENST00000559281 INCENPQ9NQS7 918 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 RLFQ13129 1914 aa21.01■□□□□ 0.95
TPM1-218ENST00000559281 FGRP09769 529 aa21■□□□□ 0.95
TPM1-218ENST00000559281 SDSP20132 328 aa21■□□□□ 0.95
TPM1-218ENST00000559281 MCCP23508 829 aa21■□□□□ 0.95
TPM1-218ENST00000559281 CHST13Q8NET6 341 aa21■□□□□ 0.95
TPM1-218ENST00000559281 PRO3102Q9H379 93 aa21■□□□□ 0.95
TPM1-218ENST00000559281 IL17RBQ9NRM6 502 aa21■□□□□ 0.95
TPM1-218ENST00000559281 ZMYND8Q9ULU4 1186 aaPredicted RBP21■□□□□ 0.95
TPM1-218ENST00000559281 RIPK3Q9Y572 518 aa21■□□□□ 0.95
TPM1-218ENST00000559281 A0A0G2JMZ2 1700 aa21■□□□□ 0.95
TPM1-218ENST00000559281 CCDC171Q6TFL3 1326 aa21■□□□□ 0.95
TPM1-218ENST00000559281 KBTBD13C9JR72 458 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 HIP1O00291 1037 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 PLA2G6O60733 806 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 PCP11498 1178 aaKnown RBP20.99■□□□□ 0.95
TPM1-218ENST00000559281 RCSD1Q6JBY9 416 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 CNPY2Q9Y2B0 182 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 ZMYM6O95789 1325 aa20.99■□□□□ 0.95
TPM1-218ENST00000559281 LRRC26Q2I0M4 334 aa20.98■□□□□ 0.95
TPM1-218ENST00000559281 RRP12Q5JTH9 1297 aaKnown RBP20.98■□□□□ 0.95
TPM1-218ENST00000559281 ZNF589Q86UQ0 364 aaPredicted RBP20.98■□□□□ 0.95
TPM1-218ENST00000559281 ANKRD35Q8N283 1001 aa20.98■□□□□ 0.95
TPM1-218ENST00000559281 DIAPH3Q9NSV4 1193 aa20.98■□□□□ 0.95
TPM1-218ENST00000559281 ZNF236Q9UL36 1845 aa20.98■□□□□ 0.95
TPM1-218ENST00000559281 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
TPM1-218ENST00000559281 NMT2O60551 498 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 MYCNP04198 464 aaPredicted RBP20.97■□□□□ 0.95
TPM1-218ENST00000559281 RARBP10826 455 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 BMP8BP34820 402 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 GJC2Q5T442 439 aaPredicted RBP20.97■□□□□ 0.95
TPM1-218ENST00000559281 ANO1Q5XXA6 986 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.97■□□□□ 0.95
TPM1-218ENST00000559281 RNF41Q9H4P4 317 aaPredicted RBP20.97■□□□□ 0.95
TPM1-218ENST00000559281 TCP11L1Q9NUJ3 509 aa20.97■□□□□ 0.95
TPM1-218ENST00000559281 DNAJC25-GNG10A0A024R161 153 aa20.96■□□□□ 0.95
TPM1-218ENST00000559281 SYN1P17600 705 aa20.96■□□□□ 0.95
TPM1-218ENST00000559281 NOVP48745 357 aa20.96■□□□□ 0.95
TPM1-218ENST00000559281 ZNF467Q7Z7K2 595 aaPredicted RBP20.96■□□□□ 0.95
TPM1-218ENST00000559281 GDF15Q99988 308 aa20.96■□□□□ 0.95
TPM1-218ENST00000559281 TRIOBPQ9H2D6 2365 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 TOP1P11387 765 aaKnown RBP20.95■□□□□ 0.94
TPM1-218ENST00000559281 AKR1A1P14550 325 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 NT5C2P49902 561 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 TKFCQ3LXA3 575 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 AKNAD1Q5T1N1 836 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 CWC27Q6UX04 472 aaKnown RBP20.95■□□□□ 0.94
TPM1-218ENST00000559281 MAMDC4Q6UXC1 1216 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 KCTD1Q719H9 257 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 RNF180Q86T96 592 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 DCAF4Q8WV16 495 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 CHMP4CQ96CF2 233 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 TTC14Q96N46 770 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 XPNPEP3Q9NQH7 507 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 TACC3Q9Y6A5 838 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 SYNGAP1Q96PV0 1343 aa20.95■□□□□ 0.94
TPM1-218ENST00000559281 ZNF213O14771 459 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 ATN1P54259 1190 aaPredicted RBP20.94■□□□□ 0.94
TPM1-218ENST00000559281 HAND2P61296 217 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 LRRC41Q15345 812 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 ACAD9Q9H845 621 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 PRKAG2Q9UGJ0 569 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 FAM184BQ9ULE4 1060 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 MTMR7Q9Y216 660 aa20.94■□□□□ 0.94
TPM1-218ENST00000559281 ZNF865P0CJ78 1059 aaPredicted RBP20.93■□□□□ 0.94
TPM1-218ENST00000559281 CCDC96Q2M329 555 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms