RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 TADA3O75528 432 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 PBX1P40424 430 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 E2F4Q16254 413 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 FILIP1LQ4L180 1135 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 PPFIBP1Q86W92 1011 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
CPNE6-210ENST00000558995 NAA15Q9BXJ9 866 aaKnown RBP15.15■□□□□ 0.02
CPNE6-210ENST00000558995 SH3BP1Q9Y3L3 701 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 TPM1P09493 284 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 KIF5BP33176 963 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 BMS1Q14692 1282 aaKnown RBP15.15■□□□□ 0.02
CPNE6-210ENST00000558995 PIK3AP1Q6ZUJ8 805 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 IGSF22Q8N9C0 903 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 WDR24Q96S15 920 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 CARD6Q9BX69 1037 aa15.15■□□□□ 0.02
CPNE6-210ENST00000558995 TSPY2A6NKD2 308 aa15.14■□□□□ 0.01
CPNE6-210ENST00000558995 CALML3P27482 149 aa15.14■□□□□ 0.01
CPNE6-210ENST00000558995 CLCN6P51797 869 aa15.14■□□□□ 0.01
CPNE6-210ENST00000558995 SMYD4Q8IYR2 804 aaPredicted RBP15.14■□□□□ 0.01
CPNE6-210ENST00000558995 ARGLU1Q9NWB6 273 aaPredicted RBP15.14■□□□□ 0.01
CPNE6-210ENST00000558995 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
CPNE6-210ENST00000558995 LDHBP07195 334 aaKnown RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 CCDC175P0C221 793 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 NT5C2P49902 561 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 RBL2Q08999 1139 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 CEP120Q8N960 986 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 FEZ2Q9UHY8 353 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 MYH6P13533 1939 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 GTPBP6O43824 516 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 MCM7P33993 719 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 ARL6IP4Q66PJ3 421 aaKnown RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 RCSD1Q6JBY9 416 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 ZNF804AQ7Z570 1209 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 POLLQ9UGP5 575 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 DLEC1Q9Y238 1755 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 APBA3O96018 575 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 USP17L8P0C7I0 530 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 TNNT3P45378 269 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 IL17AQ16552 155 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 COL23A1Q86Y22 540 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 MYCBPQ99417 103 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-210ENST00000558995 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 CD209Q9NNX6 404 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 SH3GLB2Q9NR46 395 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 MRFAP1Q9Y605 127 aa15.13■□□□□ 0.01
CPNE6-210ENST00000558995 VEGFAP15692 232 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-210ENST00000558995 NBPF20Q3BBV1 942 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-210ENST00000558995 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 STAMQ92783 540 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 RWDD2AQ9UIY3 292 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 CEP83Q9Y592 693 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 ITIH6Q6UXX5 1313 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 LRRC10BA6NIK2 292 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 SOWAHDA6NJG2 315 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 LONP1P36776 959 aaKnown RBP15.12■□□□□ 0.01
CPNE6-210ENST00000558995 SEMA3FQ13275 785 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 MTF1Q14872 753 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 RRAGBQ5VZM2 374 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 BLIDQ8IZY5 108 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 BLZF1Q9H2G9 400 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 RMND1Q9NWS8 449 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 MCM9Q9NXL9 1143 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 CALCOCO1Q9P1Z2 691 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 LIMA1Q9UHB6 759 aaKnown RBP15.12■□□□□ 0.01
CPNE6-210ENST00000558995 ADGRG1Q9Y653 693 aa15.12■□□□□ 0.01
CPNE6-210ENST00000558995 MFAP3LO75121 409 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 TBC1D16Q8TBP0 767 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-210ENST00000558995 ANKS1AQ92625 1134 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 MTRQ99707 1265 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
CPNE6-210ENST00000558995 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-210ENST00000558995 SPAG1Q07617 926 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 RAD9BQ6WBX8 426 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 C4orf32Q8N8J7 132 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 CPLX3Q8WVH0 158 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 FHOD1Q9Y613 1164 aa15.11■□□□□ 0.01
CPNE6-210ENST00000558995 ADAMTS3O15072 1205 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 BBOX1O75936 387 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 TXLNAP40222 546 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 TFAP4Q01664 338 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 PPP2R3AQ06190 1150 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 KARSQ15046 597 aaKnown RBP15.1■□□□□ 0.01
CPNE6-210ENST00000558995 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
CPNE6-210ENST00000558995 PCDHA4Q9UN74 947 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
CPNE6-210ENST00000558995 ZRANB2O95218 330 aaKnown RBP eCLIP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms