RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 VCAM1P19320 739 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 GCLCP48506 637 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 SP3Q02447 781 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 DGKZQ13574 1117 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 SH3D19Q5HYK7 790 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 TBC1D10CQ8IV04 446 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 TNS4Q8IZW8 715 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 SPICE1Q8N0Z3 855 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 NEDD1Q8NHV4 660 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 NCOA7Q8NI08 942 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 ACER1Q8TDN7 264 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 ZNF296Q8WUU4 475 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 PTPN18Q99952 460 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 RPAP3Q9H6T3 665 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 ANAPC4Q9UJX5 808 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 TMX2Q9Y320 296 aa6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 RBM8AQ9Y5S9 174 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-203ENST00000558903 ZNFX1Q9P2E3 1918 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 NEDD4P46934 1319 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 B4E1Z4 1266 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 SMIM22K7EJ46 135 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 TNPO2O14787 897 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 DHX16O60231 1041 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 KDM4AO75164 1064 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 HOXD10P28358 340 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 FCGRTP55899 365 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 CCNA1P78396 465 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 JAG1P78504 1218 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 FGD1P98174 961 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 MDM2Q00987 491 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 PTH1RQ03431 593 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 PLS1Q14651 629 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 SLFN13Q68D06 897 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 ANKRD13CQ8N6S4 541 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 CD99L2Q8TCZ2 262 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 CHMP4CQ96CF2 233 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 C12orf42Q96LP6 360 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 FAM117AQ9C073 453 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 VCPKMTQ9H867 229 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 KAT14Q9H8E8 782 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 NYAP2Q9P242 653 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 TRIM17Q9Y577 477 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 RLFQ13129 1914 aa6.86□□□□□ -1.31
CHRNA3-203ENST00000558903 TNKSO95271 1327 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 FOXP2O15409 715 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 TOP1P11387 765 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 COL9A1P20849 921 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 GUCY1A2P33402 732 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 SLC1A4P43007 532 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 STAT2P52630 851 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 HERVK_113P62684 666 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 KRT32Q14532 448 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 FAM83BQ5T0W9 1011 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 IFIT1BQ5T764 474 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 GPAT2Q6NUI2 795 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 NFXL1Q6ZNB6 911 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 CTU1Q7Z7A3 348 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 KIFC2Q96AC6 838 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 COA7Q96BR5 231 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 SLC4A5Q9BY07 1137 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 MTMR4Q9NYA4 1195 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 IVNS1ABPQ9Y6Y0 642 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 ZNF236Q9UL36 1845 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
CHRNA3-203ENST00000558903 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 A0A1W2PRG0 241 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 E7EWF7 191 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 F5H6K3 240 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 ARHGAP33O14559 1287 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 IFIT3O14879 490 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 NMT2O60551 498 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 ZBED4O75132 1171 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 NDUFB10O96000 172 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 GNRH1P01148 92 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 CYP21A2P08686 494 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 BMP3P12645 472 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 DNAJB2P25686 324 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 PSMC4P43686 418 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 LACTBP83111 547 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 KLRC3Q07444 240 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 MOGSQ13724 837 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 COG2Q14746 738 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 WTAPQ15007 396 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 CREB3L3Q68CJ9 461 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 SYNE3Q6ZMZ3 975 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms