RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 COL2A1P02458 1487 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-206ENST00000558880 ZMYM6O95789 1325 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 PITPNM2Q9BZ72 1349 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 ADM5C9JUS6 153 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 USP17L21D6R901 530 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 TRPA1O75762 1119 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 TCP10Q12799 353 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 NR1H3Q13133 447 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 NOGQ13253 232 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 SHROOM1Q2M3G4 852 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-206ENST00000558880 C12orf60Q5U649 245 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 GIMAP6Q6P9H5 292 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 FAM83AQ86UY5 434 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 TBC1D10CQ8IV04 446 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 FAM151AQ8WW52 585 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 DEFB129Q9H1M3 183 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 ATP8A2Q9NTI2 1148 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 ANAPC4Q9UJX5 808 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 FZD1Q9UP38 647 aa8.65□□□□□ -1.02
TRAF3-206ENST00000558880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRAF3-206ENST00000558880 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.02
TRAF3-206ENST00000558880 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 SLC27A2O14975 620 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 GNAT2P19087 354 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 HSPA4P34932 840 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 HUNKP57058 714 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 PICALMQ13492 652 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 SLC4A8Q2Y0W8 1093 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 CTU1Q7Z7A3 348 aaKnown RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 SLC44A5Q8NCS7 719 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 DYNLL2Q96FJ2 89 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 CRNKL1Q9BZJ0 848 aaKnown RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 SAP30BPQ9UHR5 308 aaKnown RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 CDV3Q9UKY7 258 aaKnown RBP8.64□□□□□ -1.03
TRAF3-206ENST00000558880 SIPA1L1O43166 1804 aa8.64□□□□□ -1.03
TRAF3-206ENST00000558880 ROBO3Q96MS0 1386 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 MYH7P12883 1935 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 FAM196BA6NMK8 535 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 EPB41L2O43491 1005 aaKnown RBP8.63□□□□□ -1.03
TRAF3-206ENST00000558880 SHMT1P34896 483 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 PPARAQ07869 468 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 IRF5Q13568 498 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 CREB3L3Q68CJ9 461 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 USP48Q86UV5 1035 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 VEZTQ9HBM0 779 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 MCM9Q9NXL9 1143 aa8.63□□□□□ -1.03
TRAF3-206ENST00000558880 NEDD4P46934 1319 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 DLL1O00548 723 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 USP5P45974 858 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 MFAP1P55081 439 aaKnown RBP8.62□□□□□ -1.03
TRAF3-206ENST00000558880 HAND2P61296 217 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 KIF23Q02241 960 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-206ENST00000558880 TATDN1Q6P1N9 297 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 C16orf86Q6ZW13 317 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 POM121Q96HA1 1249 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 EHD4Q9H223 541 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 TMPRSS4Q9NRS4 437 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 RNF186Q9NXI6 227 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 ZNF112Q9UJU3 913 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 SNX14Q9Y5W7 946 aa8.62□□□□□ -1.03
TRAF3-206ENST00000558880 USP2O75604 605 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 RASA1P20936 1047 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 NOVP48745 357 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 RBM25P49756 843 aaKnown RBP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 FXR1P51114 621 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 ANTXR2P58335 489 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 VAC14Q08AM6 782 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 CBLBQ13191 982 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 C6orf118Q5T5N4 469 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 RGMBQ6NW40 437 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 MOB2Q70IA6 237 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 CDC37L1Q7L3B6 337 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 KRT26Q7Z3Y9 468 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 SIAH1Q8IUQ4 282 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 APOBEC3FQ8IUX4 373 aaKnown RBP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 NAPBQ9H115 298 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 SAGE1Q9NXZ1 904 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 ARPP21Q9UBL0 812 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-206ENST00000558880 PPP2R3BQ9Y5P8 575 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
TRAF3-206ENST00000558880 FOCADQ5VW36 1801 aa8.6□□□□□ -1.03
TRAF3-206ENST00000558880 IGKV6D-41A0A0C4DH26 115 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms