RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 ATP5JP18859 108 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 DNAJB2P25686 324 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 FAAP100Q0VG06 881 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 ANKRD33Q7Z3H0 272 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 REPS2Q8NFH8 660 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 SLF1Q9BQI6 1058 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 ZHX1Q9UKY1 873 aaPredicted RBP18.38■□□□□ 0.53
CPNE6-208ENST00000558795 DDX19BQ9UMR2 479 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 SYNRGQ9UMZ2 1314 aa18.38■□□□□ 0.53
CPNE6-208ENST00000558795 UBE3CQ15386 1083 aa18.37■□□□□ 0.53
CPNE6-208ENST00000558795 SNRNP48Q6IEG0 339 aaKnown RBP18.37■□□□□ 0.53
CPNE6-208ENST00000558795 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
CPNE6-208ENST00000558795 HAUS7Q99871 368 aa18.37■□□□□ 0.53
CPNE6-208ENST00000558795 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
CPNE6-208ENST00000558795 CTDP1Q9Y5B0 961 aaPredicted RBP18.37■□□□□ 0.53
CPNE6-208ENST00000558795 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
CPNE6-208ENST00000558795 TIMP1P01033 207 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 SLC4A3P48751 1232 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 GRIN2CQ14957 1233 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 KCNA10Q16322 511 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 MROH7Q68CQ1 1323 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 CCDC174Q6PII3 467 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 KLHDC9Q8NEP7 349 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 GLT1D1Q96MS3 346 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
CPNE6-208ENST00000558795 PRDM6Q9NQX0 595 aa18.36■□□□□ 0.53
CPNE6-208ENST00000558795 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
CPNE6-208ENST00000558795 CHGBP05060 677 aa18.35■□□□□ 0.53
CPNE6-208ENST00000558795 PCSK9Q8NBP7 692 aaKnown RBP18.35■□□□□ 0.53
CPNE6-208ENST00000558795 VTI1AQ96AJ9 217 aa18.35■□□□□ 0.53
CPNE6-208ENST00000558795 TIFAQ96CG3 184 aa18.35■□□□□ 0.53
CPNE6-208ENST00000558795 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
CPNE6-208ENST00000558795 SPC25Q9HBM1 224 aa18.35■□□□□ 0.53
CPNE6-208ENST00000558795 ELP1O95163 1332 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 GREB1LQ9C091 1923 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 DUSP11O75319 330 aaKnown RBP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 SNAI1O95863 264 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 C6orf222P0C671 652 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 MFSD5Q6N075 450 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 CPXCR1Q8N123 301 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
CPNE6-208ENST00000558795 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 TBX21Q9UL17 535 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 EYSQ5T1H1 3165 aa18.34■□□□□ 0.53
CPNE6-208ENST00000558795 DNAJC25-GNG10A0A024R161 153 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 MYADML2A6NDP7 307 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 F5H6K3 240 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 ZBED4O75132 1171 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 NDUFB10O96000 172 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 KLRC3Q07444 240 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 ZNF467Q7Z7K2 595 aaPredicted RBP18.33■□□□□ 0.52
CPNE6-208ENST00000558795 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.52
CPNE6-208ENST00000558795 PUS7LQ9H0K6 701 aaKnown RBP18.33■□□□□ 0.52
CPNE6-208ENST00000558795 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.33■□□□□ 0.52
CPNE6-208ENST00000558795 NYAP2Q9P242 653 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 RIPK3Q9Y572 518 aa18.33■□□□□ 0.52
CPNE6-208ENST00000558795 ASGR1P07306 291 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 CST5P28325 142 aaPredicted RBP18.32■□□□□ 0.52
CPNE6-208ENST00000558795 CCSAPQ6IQ19 270 aaPredicted RBP18.32■□□□□ 0.52
CPNE6-208ENST00000558795 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 TMEM199Q8N511 208 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 USP38Q8NB14 1042 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 GAS2L1Q99501 681 aaPredicted RBP18.32■□□□□ 0.52
CPNE6-208ENST00000558795 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
CPNE6-208ENST00000558795 VCANP13611 3396 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 MYH4Q9Y623 1939 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
CPNE6-208ENST00000558795 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 TLR3O15455 904 aaKnown RBP18.31■□□□□ 0.52
CPNE6-208ENST00000558795 RASA1P20936 1047 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
CPNE6-208ENST00000558795 FBXO40Q9UH90 709 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 MCM3APO60318 1980 aa18.31■□□□□ 0.52
CPNE6-208ENST00000558795 TTC28Q96AY4 2481 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 ARVCFO00192 962 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 CDK7P50613 346 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 GNASQ5JWF2 1037 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 TMEM240Q5SV17 173 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 PSRC1Q6PGN9 363 aaPredicted RBP18.3■□□□□ 0.52
CPNE6-208ENST00000558795 PPM1EQ8WY54 764 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 PPP1R12CQ9BZL4 782 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 UPF3AQ9H1J1 476 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms