RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MRVI1Q9Y6F6 885 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
SMAD3-207ENST00000558763 USP17L5A8MUK1 530 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 KLRF2D3W0D1 207 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 M0R2N6 131 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 TYRO3Q06418 890 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 MAP1SQ66K74 1059 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 PIBF1Q8WXW3 757 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 GPKOWQ92917 476 aaPredicted RBP eCLIP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 PDLIM2Q96JY6 352 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 GLIS2Q9BZE0 524 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 PFKFB1P16118 471 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 TATDN1Q6P1N9 297 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 SH3GLB2Q9NR46 395 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 FBXO2Q9UK22 296 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-207ENST00000558763 FZD1Q9UP38 647 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 PPP2R3BQ9Y5P8 575 aa14.87□□□□□ -0.03
SMAD3-207ENST00000558763 SSC5DA1L4H1 1573 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 TTLL1O95922 423 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 PARP1P09874 1014 aaKnown RBP14.86□□□□□ -0.03
SMAD3-207ENST00000558763 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 GRIN1Q05586 938 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 RESP18Q5W5W9 173 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 CLIC6Q96NY7 704 aa14.86□□□□□ -0.03
SMAD3-207ENST00000558763 GPBP1L1Q9HC44 474 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-207ENST00000558763 HERC5Q9UII4 1024 aaKnown RBP14.86□□□□□ -0.03
SMAD3-207ENST00000558763 STXBP3O00186 592 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 PTPREP23469 700 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 JMYQ8N9B5 988 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 RIOX1Q9H6W3 641 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
SMAD3-207ENST00000558763 KINO60870 393 aaKnown RBP14.85□□□□□ -0.03
SMAD3-207ENST00000558763 CUTAO60888 179 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 GDF11O95390 407 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 LDHDQ86WU2 507 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
SMAD3-207ENST00000558763 CCDC173Q0VFZ6 552 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 PRKG1Q13976 671 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 RRP1BQ14684 758 aaKnown RBP14.84□□□□□ -0.03
SMAD3-207ENST00000558763 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-207ENST00000558763 SIAH1Q8IUQ4 282 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 DAGLBQ8NCG7 672 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 CDCA5Q96FF9 252 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 CTAGE5O15320 804 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 ZNF202O95125 648 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 NLRP5P59047 1200 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 JAG1P78504 1218 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
SMAD3-207ENST00000558763 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 PCDHA4Q9UN74 947 aa14.84□□□□□ -0.03
SMAD3-207ENST00000558763 TRAF5O00463 557 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 TBC1D12O60347 775 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF543Q08ER8 600 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 UVSSAQ2YD98 709 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 SUPT20HL1Q3ZLR7 823 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 ASPRV1Q53RT3 343 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
SMAD3-207ENST00000558763 FAM177A1Q8N128 213 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-207ENST00000558763 FRMPD2Q68DX3 1309 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-207ENST00000558763 TRIM75PA6NK02 468 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 CALML3P27482 149 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 DCAF15Q66K64 600 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 FAM200AQ8TCP9 573 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 RASGRP4Q8TDF6 673 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ERCC4Q92889 916 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-207ENST00000558763 MKL1Q969V6 931 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 UBA5Q9GZZ9 404 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ATP2B1P20020 1258 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ABCB5Q2M3G0 1257 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 HEATR3Q7Z4Q2 680 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF579Q8NAF0 562 aaKnown RBP14.82□□□□□ -0.04
SMAD3-207ENST00000558763 TIGD1Q96MW7 591 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 PIGSQ96S52 555 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ZMYND12Q9H0C1 365 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF408Q9H9D4 720 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 NYAP2Q9P242 653 aa14.82□□□□□ -0.04
SMAD3-207ENST00000558763 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-207ENST00000558763 A0A087WWV3 80 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 AP5Z1O43299 807 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 GH2P01242 217 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 SEPT2Q15019 361 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 SPECC1Q5M775 1068 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms