RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MORN1Q5T089 497 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 WDR78Q5VTH9 848 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 RIOX2Q8IUF8 465 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 SH3TC2Q8TF17 1288 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 MOV10L1Q9BXT6 1211 aaKnown RBP9.98□□□□□ -0.81
TPM1-213ENST00000558400 ZSWIM5Q9P217 1185 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 TMEM232C9JQI7 657 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 H0YGN5 161 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 NMT2O60551 498 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 KDM4AO75164 1064 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 HMGCRP04035 888 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 HOXC6P09630 235 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 FCER1AP12319 257 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 ERCC3P19447 782 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 CYP2B6P20813 491 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 STAT2P52630 851 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 OAZ1P54368 228 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 TMEM132BQ14DG7 1078 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 TBC1D10CQ8IV04 446 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 LRRC47Q8N1G4 583 aaKnown RBP9.97□□□□□ -0.81
TPM1-213ENST00000558400 DCAF4Q8WV16 495 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 USP6NLQ92738 828 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 TMEM47Q9BQJ4 181 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 UBAC1Q9BSL1 405 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 TEX13BQ9BXU2 312 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 RNF208Q9H0X6 261 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 FBXO28Q9NVF7 368 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 TACC3Q9Y6A5 838 aa9.97□□□□□ -0.81
TPM1-213ENST00000558400 B4E1Z4 1266 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 PEX10O60683 326 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 GJB1P08034 283 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 PTH1RQ03431 593 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 IKQ13123 557 aaPredicted RBP9.96□□□□□ -0.82
TPM1-213ENST00000558400 GRB14Q14449 540 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 MFSD14CQ5VZR4 134 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 NCOA7Q8NI08 942 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 ZSCAN10Q96SZ4 725 aaPredicted RBP9.96□□□□□ -0.82
TPM1-213ENST00000558400 NUP88Q99567 741 aaPredicted RBP9.96□□□□□ -0.82
TPM1-213ENST00000558400 APBA2Q99767 749 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 SLC38A10Q9HBR0 1119 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
TPM1-213ENST00000558400 FBXO40Q9UH90 709 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
TPM1-213ENST00000558400 RPTORQ8N122 1335 aa9.96□□□□□ -0.82
TPM1-213ENST00000558400 MYH8P13535 1937 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 ERICH2A1L162 156 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 CDC45O75419 566 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 INHAP05111 366 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 CYP21A2P08686 494 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 CCL5P13501 91 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 ELNP15502 786 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 KCTD2Q14681 263 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 TKFCQ3LXA3 575 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 GPATCH4Q5T3I0 446 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 BTNL9Q6UXG8 535 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 CHST13Q8NET6 341 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 REPS2Q8NFH8 660 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 MTA3Q9BTC8 594 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 IL25Q9H293 177 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 KAT14Q9H8E8 782 aa9.95□□□□□ -0.82
TPM1-213ENST00000558400 RBM27Q9P2N5 1060 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 ZNF214Q9UL59 606 aaPredicted RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 DIS3Q9Y2L1 958 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 RBM8AQ9Y5S9 174 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 RANBP2P49792 3224 aaKnown RBP9.95□□□□□ -0.82
TPM1-213ENST00000558400 NEDD4P46934 1319 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 SGPL1O95470 568 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 ZKSCAN1P17029 563 aaPredicted RBP9.94□□□□□ -0.82
TPM1-213ENST00000558400 ADORA2AP29274 412 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 GJA8P48165 433 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 MTFR1Q15390 333 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 CCDC96Q2M329 555 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 IFIT1BQ5T764 474 aaKnown RBP9.94□□□□□ -0.82
TPM1-213ENST00000558400 OLFML2BQ68BL8 750 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 KCTD1Q719H9 257 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 CPXCR1Q8N123 301 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 DDX11Q96FC9 970 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 MMP19Q99542 508 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 LSG1Q9H089 658 aaKnown RBP9.94□□□□□ -0.82
TPM1-213ENST00000558400 ANO2Q9NQ90 1003 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 A0A0C4DFX4 3053 aa9.94□□□□□ -0.82
TPM1-213ENST00000558400 E7EWF7 191 aa9.93□□□□□ -0.82
TPM1-213ENST00000558400 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
TPM1-213ENST00000558400 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
TPM1-213ENST00000558400 PDHBP11177 359 aa9.93□□□□□ -0.82
TPM1-213ENST00000558400 ZNF543Q08ER8 600 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms