RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ADD2P35612 726 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 C12orf60Q5U649 245 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 RILPL2Q969X0 211 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 LENG1Q96BZ8 264 aaPredicted RBP13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 TINF2Q9BSI4 451 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 USP17L21D6R901 530 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 CLTBP09497 229 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 REPS2Q8NFH8 660 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
RABGGTA-204ENST00000558376 MYH7P12883 1935 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 VWA5AO00534 786 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 STAT3P40763 770 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 SH2D4AQ9H788 454 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 ZNF214Q9UL59 606 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 MCM3APO60318 1980 aa13.32□□□□□ -0.28
RABGGTA-204ENST00000558376 A0A1W2PQ45 241 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 A0A1W2PQY0 241 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 PQBP1O60828 265 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 RNF180Q86T96 592 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 FOSL2P15408 326 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 RAG1P15918 1043 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 FAAP100Q0VG06 881 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 KCTD2Q14681 263 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
RABGGTA-204ENST00000558376 CDC45O75419 566 aa13.3□□□□□ -0.28
RABGGTA-204ENST00000558376 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-204ENST00000558376 GRIN2CQ14957 1233 aa13.3□□□□□ -0.28
RABGGTA-204ENST00000558376 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
RABGGTA-204ENST00000558376 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-204ENST00000558376 SNAI1O95863 264 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 AKR1A1P14550 325 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 ACLYP53396 1101 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 FPGSQ05932 587 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 ANKRD33Q7Z3H0 272 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 USP38Q8NB14 1042 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 TSEN34Q9BSV6 310 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 RIPK3Q9Y572 518 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 RAD21O60216 631 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 ATP5JP18859 108 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 TOX2Q96NM4 488 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 HAUS7Q99871 368 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
RABGGTA-204ENST00000558376 TTC41PQ6P2S7 1318 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 SYNRGQ9UMZ2 1314 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 KCNA10Q16322 511 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 PRDM6Q9NQX0 595 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 STARD7Q9NQZ5 370 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 NCOR1O75376 2440 aa13.28□□□□□ -0.28
RABGGTA-204ENST00000558376 DCDC2CA8MYV0 355 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 DNAJB2P25686 324 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 COPB2P35606 906 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 C16orf59Q7L2K0 433 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.27□□□□□ -0.284e-7■■□□□ 11.9
RABGGTA-204ENST00000558376 PUS7LQ9H0K6 701 aaKnown RBP13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 TBX21Q9UL17 535 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.28
RABGGTA-204ENST00000558376 MYH4Q9Y623 1939 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 ERC2O15083 957 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 ADCY6O43306 1168 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 TIMP1P01033 207 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 CDK7P50613 346 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 AMOTL1Q8IY63 956 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
RABGGTA-204ENST00000558376 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.27□□□□□ -0.295e-6■■■■■ 34.6
RABGGTA-204ENST00000558376 MOXD2PA6NHM9 499 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 NDUFB10O96000 172 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 RASA1P20936 1047 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 CHMLP26374 656 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms