RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 F5H6K3 240 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 MCM2P49736 904 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 KLRC3Q07444 240 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 PLS1Q14651 629 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
TPM1-212ENST00000558347 NPLOC4Q8TAT6 608 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
TPM1-212ENST00000558347 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM1-212ENST00000558347 IVNS1ABPQ9Y6Y0 642 aa12.08□□□□□ -0.48
TPM1-212ENST00000558347 NDUFB10O96000 172 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 HOXC6P09630 235 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 ADORA2AP29274 412 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 ANAPC15P60006 121 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 TFAP4Q01664 338 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 REPS2Q8NFH8 660 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 DIS3LQ8TF46 1054 aaKnown RBP12.07□□□□□ -0.48
TPM1-212ENST00000558347 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 MKL1Q969V6 931 aa12.07□□□□□ -0.48
TPM1-212ENST00000558347 VWA5AO00534 786 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 MCCP23508 829 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 CCND3P30281 292 aaPredicted RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 HSPA4P34932 840 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 ALX1Q15699 326 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 FRMPD3Q5JV73 1810 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 STRNO43815 780 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 COBLO75128 1261 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 TTLL1O95922 423 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 IGHA2P01877 340 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 FGAP02671 866 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 PTH1RQ03431 593 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 DPF3Q92784 378 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 KCNB2Q92953 911 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 DSCC1Q9BVC3 393 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 MROH8Q9H579 483 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
TPM1-212ENST00000558347 OGDHLQ9ULD0 1010 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 ALPK3Q96L96 1907 aa12.06□□□□□ -0.48
TPM1-212ENST00000558347 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
TPM1-212ENST00000558347 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 NMT2O60551 498 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 SLC25A27O95847 323 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 CAPN2P17655 700 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 CYP2C19P33261 490 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 LHX8Q68G74 356 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 DPP9Q86TI2 863 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 RIOX2Q8IUF8 465 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 GMCL1P1Q8NEA9 526 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 IL17RBQ9NRM6 502 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
TPM1-212ENST00000558347 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 H0YGN5 161 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 ORC4O43929 436 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 FGRP09769 529 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 STAT3P40763 770 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 CHMP4CQ96CF2 233 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
TPM1-212ENST00000558347 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
TPM1-212ENST00000558347 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
TPM1-212ENST00000558347 CEP290O15078 2479 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
TPM1-212ENST00000558347 FCER1AP12319 257 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 HAND2P61296 217 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 NECAB2Q7Z6G3 386 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 PRPF38AQ8NAV1 312 aaKnown RBP12.03□□□□□ -0.48
TPM1-212ENST00000558347 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 RIPK3Q9Y572 518 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
TPM1-212ENST00000558347 PGK2P07205 417 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 BMP3P12645 472 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 CYBAP13498 195 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 NOVP48745 357 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms